Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C15
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   4.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   4.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   4.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   7.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 1   HXLXYHLTIGNSLRFDILVSSSETDTSQNEFQTIIFLR 114
           H L Y+L++G  LR+D + +    + S+ E   I+ LR
Sbjct: 183 HFLTYNLSLGIKLRYDDVNNLFRIEESE-EKNIIVSLR 219


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 1   HXLXYHLTIGNSLRFDILVSSSETDTSQNEFQTIIFLR 114
           H L Y+L++G  LR+D + +    + S+ E   I+ LR
Sbjct: 183 HFLTYNLSLGIKLRYDDVNNLFRIEESE-EKNIIVSLR 219


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 149 WEDEEGYPVSGQFSK 193
           W++EE  P+ G+F++
Sbjct: 584 WQNEENCPIGGKFAE 598


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  DILVSSSETDTSQNEFQTIIFLRHGPGVC 132
           D+L+ +S  +     FQT + ++HG G C
Sbjct: 89  DVLMYNSADEGFDGTFQTNVVVKHG-GSC 116


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  DILVSSSETDTSQNEFQTIIFLRHGPGVC 132
           D+L+ +S  +     FQT + ++HG G C
Sbjct: 89  DVLMYNSADEGFDGTFQTNVVVKHG-GSC 116


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  DILVSSSETDTSQNEFQTIIFLRHGPGVC 132
           D+L+ +S  +     FQT + ++HG G C
Sbjct: 89  DVLMYNSADEGFDGTFQTNVVVKHG-GSC 116


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 712 NRLICNYLSAFCXFLFNHQHSS 777
           +R   +++  +C FL+N  HS+
Sbjct: 131 HRYTLSFIENYCQFLYNCFHST 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,691
Number of Sequences: 336
Number of extensions: 4334
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)