Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C12
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 163 1e-40
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 163 1e-40
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 163 1e-40
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 163 1e-40
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 163 1e-40
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 163 1e-40
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 163 2e-40
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 163 2e-40
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 162 4e-40
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 158 6e-39
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 5e-21
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 1e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 74 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 68 8e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 37 0.017
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.039
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.039
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 1.5
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 4.5
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 6.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 85 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 142
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 143 GDGVTHT-VPIYEGYALPHA 161
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 211 KAGFAGDDAPRAVFPSIVGRPRHQG 285
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 163 bits (397), Expect = 1e-40
Identities = 89/140 (63%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG V DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 163 bits (396), Expect = 2e-40
Identities = 88/140 (62%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG + DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (396), Expect = 2e-40
Identities = 88/140 (62%), Positives = 95/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + + P + VLSLYASG + DS
Sbjct: 99 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI-VLDS 156
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 157 GDGVTHT-VPIYEGYALPHA 175
Score = 92.7 bits (220), Expect = 3e-19
Identities = 39/43 (90%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 162 bits (393), Expect = 4e-40
Identities = 79/110 (71%), Positives = 85/110 (77%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLTEAPLNP+ R + + P + VLSLYASG
Sbjct: 98 PEEHPVLLTEAPLNPKS-NREKMTQIMFETFNTPAMYVNIQAVLSLYASG 146
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 163 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 37.5 bits (83), Expect = 0.013
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAGSPTLXDY 738
GIVL V+ HTVPIYEGYAL P LDLAG L DY
Sbjct: 150 GIVLDTGDGVT-HTVPIYEGYAL-PHAIQRLDLAGR-DLTDY 188
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 158 bits (383), Expect = 6e-39
Identities = 86/134 (64%), Positives = 91/134 (67%)
Frame = +2
Query: 290 MVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPV 469
MVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 470 LLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDSXDRCLP 649
LLTEAPLNP+ R + + P + VLSLYASG V DS D
Sbjct: 61 LLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTH 118
Query: 650 TPCPSTKDTHSPHA 691
T P + PHA
Sbjct: 119 T-VPIYEGYALPHA 131
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 98.7 bits (235), Expect = 5e-21
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 448
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 449 APEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLT+APLNP R + + P + VLSLYA+G
Sbjct: 101 FPEEHPVLLTDAPLNPL-KNRERSAEIFFETFNVPALYIQMQAVLSLYATG 150
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 279
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 415
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 415
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 415
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 91.5 bits (217), Expect = 7e-19
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDM 406
P +GVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 308 KDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEXPVLLTEA 484
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 485 PLNP 496
PLNP
Sbjct: 113 PLNP 116
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 273
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 68.1 bits (159), Expect = 8e-12
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 VMVGMGQKDSYVGDEAQSXRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEX 463
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 464 PVLLTEAPLN 493
LLTE PLN
Sbjct: 116 FFLLTEPPLN 125
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 157 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 264
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 371 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHA 550
++ G++ +W+ EKI H++ N L P E PVL +E+ N + +R + +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRA-RREKLTEIMFEKFQV 152
Query: 551 PPCTSPSKPVLSLYASG 601
P VLS +A G
Sbjct: 153 PAYYLSKNVVLSCFAQG 169
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 264
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 305 QKDSYVGDEAQSXRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 430
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 305 QKDSYVGDEAQSXRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 430
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 166 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 312
++++ L D G C AG G PR P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 223 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCR 324
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 45 IPRSELGSLRCTAITKLCNSKLIYLFIIE 131
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,805
Number of Sequences: 27780
Number of extensions: 472877
Number of successful extensions: 1625
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -