Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C12
(896 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 160 1e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 160 1e-39
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 159 2e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 159 2e-39
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 159 3e-39
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 159 3e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 157 9e-39
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 157 9e-39
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 157 9e-39
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 144 5e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 126 2e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 116 2e-26
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 81 7e-16
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 66 4e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 64 9e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 59 3e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 3e-04
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.78
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.78
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 31 1.4
At3g12650.1 68416.m01575 expressed protein 30 1.8
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 28 7.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 7.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 7.3
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 28 9.7
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 160 bits (388), Expect = 1e-39
Identities = 78/110 (70%), Positives = 84/110 (76%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE P+LLTEAPLNP+ R + +AP + VLSLYASG
Sbjct: 100 PEEHPILLTEAPLNPKA-NREKMTQIMFETFNAPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 184
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 160 bits (388), Expect = 1e-39
Identities = 78/110 (70%), Positives = 84/110 (76%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE P+LLTEAPLNP+ R + +AP + VLSLYASG
Sbjct: 100 PEEHPILLTEAPLNPKA-NREKMTQIMFETFNAPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 184
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 159 bits (386), Expect = 2e-39
Identities = 78/110 (70%), Positives = 84/110 (76%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLTEAPLNP+ R + + P + VLSLYASG
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNVPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 184
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 159 bits (386), Expect = 2e-39
Identities = 78/110 (70%), Positives = 84/110 (76%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLTEAPLNP+ R + + P + VLSLYASG
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAGSPTLXDY 738
GIVL VS HTVPIYEGYAL P LDLAG L DY
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAGR-DLTDY 190
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 159 bits (385), Expect = 3e-39
Identities = 78/110 (70%), Positives = 83/110 (75%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLTEAPLNP+ R + + P + VLSLYASG
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 184
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 159 bits (385), Expect = 3e-39
Identities = 78/110 (70%), Positives = 83/110 (75%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGMGQKD+YVGDEAQS RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE PVLLTEAPLNP+ R + + P + VLSLYASG
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNTPAMYVAIQAVLSLYASG 148
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 152 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 184
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 157 bits (381), Expect = 9e-39
Identities = 83/140 (59%), Positives = 94/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGM QKD+YVGDEAQS RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + ++P + VLSLYASG + DS
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI-VLDS 157
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 158 GDGVSHT-VPIYEGFSLPHA 176
Score = 71.3 bits (167), Expect = 8e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 157 bits (381), Expect = 9e-39
Identities = 83/140 (59%), Positives = 94/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGM QKD+YVGDEAQS RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + ++P + VLSLYASG + DS
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI-VLDS 157
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 158 GDGVSHT-VPIYEGFSLPHA 176
Score = 71.3 bits (167), Expect = 8e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 157 bits (381), Expect = 9e-39
Identities = 83/140 (59%), Positives = 94/140 (67%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P GVMVGM QKD+YVGDEAQS RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDS 631
PEE PVLLTEAPLNP+ R + ++P + VLSLYASG + DS
Sbjct: 100 PEEHPVLLTEAPLNPKA-NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI-VLDS 157
Query: 632 XDRCLPTPCPSTKDTHSPHA 691
D T P + PHA
Sbjct: 158 GDGVSHT-VPIYEGFSLPHA 176
Score = 71.3 bits (167), Expect = 8e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 144 bits (350), Expect = 5e-35
Identities = 69/110 (62%), Positives = 82/110 (74%)
Frame = +2
Query: 272 PAIRGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 451
P RGVMVGM +KD++VGDEAQ+ RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 41 PRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLE 100
Query: 452 PEEXPVLLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
PEE P+LLTEAPLNP+ R + P + VLSLY+SG
Sbjct: 101 PEEHPILLTEAPLNPK-VNREKMTQIMFESFAFPSMYIGIQAVLSLYSSG 149
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 285
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+G
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRG 45
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/35 (65%), Positives = 23/35 (65%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAG 717
GIVL VS HTVPIYEGYAL P LDLAG
Sbjct: 153 GIVLDSGDGVS-HTVPIYEGYAL-PHAILRLDLAG 185
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 126 bits (305), Expect = 2e-29
Identities = 60/104 (57%), Positives = 74/104 (71%)
Frame = +2
Query: 290 MVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPV 469
MVGM + D +VGD+A++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEE PV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 470 LLTEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
LLTEAPLNP+ R + P + LSL+ASG
Sbjct: 61 LLTEAPLNPKA-DREKMTQIMFETFAVPSMYIGMQAALSLHASG 103
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 116 bits (279), Expect = 2e-26
Identities = 57/102 (55%), Positives = 67/102 (65%)
Frame = +2
Query: 296 GMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLL 475
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEE PVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 476 TEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
TEAP NP+ R + P + VL LY+SG
Sbjct: 97 TEAPYNPKA-NREKMTQIMFESFDVPAMYVSMQSVLYLYSSG 137
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 276
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +1
Query: 613 GIVLGLXGPVSPHTVPIYEGYALPPRPSWGLDLAGSPTLXDY 738
G+VL L VS HTVP+YEGYAL P LDL G L DY
Sbjct: 141 GVVLDLGERVS-HTVPVYEGYAL-PHGILRLDLGGR-DLTDY 179
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 81.4 bits (192), Expect = 7e-16
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 308 KDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLLTEAP 487
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 488 LNP 496
LNP
Sbjct: 111 LNP 113
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 273
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 65.7 bits (153), Expect = 4e-11
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 251 SPRSWEGPAIRGVMVGMGQKDSYVGDEAQSX-RGILT--LKYPIEHGIVTNWDDMEKIWH 421
S +W+ GV + D Y+GDEA + R T L YPIEHG V +WD ME+ W
Sbjct: 50 SKATWQTQHNAGVAADL---DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQ 106
Query: 422 HTFYNELRVAPEEXPVLLTEAPLNP 496
+N LR PE+ LLTE+PL P
Sbjct: 107 QCIFNYLRCDPEDHYFLLTESPLTP 131
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 178 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 264
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 64.5 bits (150), Expect = 9e-11
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 317 YVGDEAQSXR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLLTEAPLN 493
YVG +A S R + + PI+ GIV++WD ++ IW H F + L + P E P+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 494 PQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASG 601
Q QR + + P PVL+ +A+G
Sbjct: 136 TQ-QQREKAAELMFEKYKVPALFMAKNPVLTSFATG 170
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 267
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 302 GQKDSYVGDEAQSXR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLLT 478
G++ Y G +A + R + + P + GIVT+WD ++ +W H F N L + P E P+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 479 EAPLNPQ 499
E PLN Q
Sbjct: 125 EPPLNSQ 131
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1
Query: 166 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRD 291
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G D
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMD 46
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 359 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEXPVLLTEAPLNPQGXQRXDD 520
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ QR D
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTD 114
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 273
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 181 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 282
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Frame = +3
Query: 426 PSTMSCVSPPRNXQSCSLRLPSTPKAXREXMTQIMFETFXTPRHV-RRHPSPCSRCTRPG 602
P + +C SPP + + PS P T T TP H H PC+ + P
Sbjct: 53 PPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPS 112
Query: 603 R-TXGYRAGTPGTGVSPHRAHLRRIRTPP--TPILGSGLSRVADP 728
+ TP H +PP TP++ + S + DP
Sbjct: 113 HPSTPSHPSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDP 157
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Frame = +3
Query: 426 PSTMSCVSPPRNXQSCSLRLPSTPKAXREXMTQIMFETFXTPRHV-RRHPSPCSRCTRPG 602
P + +C SPP + + PS P T T TP H H PC+ + P
Sbjct: 53 PPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPS 112
Query: 603 R-TXGYRAGTPGTGVSPHRAHLRRIRTPP--TPILGSGLSRVADP 728
+ TP H +PP TP++ + S + DP
Sbjct: 113 HPSTPSHPSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDP 157
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 368 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEXPVLLTEAPLNPQGXQRXDDPDHVRNIX 544
PIE G++ +WD ME + + Y L E +L T+ P+ R +
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAI-REQLVQLMFETF 115
Query: 545 HAPPCTSPSKPVLSLYASG 601
+ + + VLSLYA G
Sbjct: 116 NVSGFYASEQAVLSLYAVG 134
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 492 TPKAXREXMTQIMFETF 542
TPKA RE + Q+MFETF
Sbjct: 99 TPKAIREQLVQLMFETF 115
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 493 VEGSLSEQDWXFLGGDTQLIVEGMMPNL 410
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 272 GLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 165
GL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 299 GLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 326 DEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 454
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 326 DEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 454
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 27.9 bits (59), Expect = 9.7
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Frame = +2
Query: 476 TEAPLNPQGXQRXDDPDHVRNIXHAPPCTSPSKPVLSLYASGSYXRVSCWDSXDRCL--- 646
+ AP P P+ ++ PP SPS + YAS S + +
Sbjct: 40 SSAPPVPPNASLSIPPNSSPSVKLTPPYASPSVKLTPPYASPSVRPAGTTPNASPSVKLT 99
Query: 647 -PTPCPSTKDTHSPHAHPGV-----WT*PGRRPSXTTLXXDP 754
P PS + +P+A P V + P RP+ TT P
Sbjct: 100 PPYASPSMRPAGTPNASPSVKLTPPYASPSVRPTGTTPNASP 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,428,180
Number of Sequences: 28952
Number of extensions: 457545
Number of successful extensions: 1172
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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