Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C11
(867 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 177 3e-43
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 153 7e-36
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 148 2e-34
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 121 1e-33
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 143 4e-33
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 141 2e-32
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 140 3e-32
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 126 1e-27
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 116 6e-25
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 114 3e-24
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 109 7e-23
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 99 2e-19
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 85 2e-15
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 81 3e-14
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 81 3e-14
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 76 1e-12
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 69 2e-10
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 63 1e-08
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 60 9e-08
UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5; ... 56 1e-06
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 54 5e-06
UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1; Encepha... 50 1e-04
UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA... 49 2e-04
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 48 2e-04
UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella ve... 47 5e-04
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 47 7e-04
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 46 0.001
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 46 0.002
UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible ... 45 0.003
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.012
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 42 0.020
UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep: Zgc:8... 42 0.027
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 40 0.062
UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arr... 40 0.082
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 39 0.14
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 39 0.14
UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containin... 39 0.19
UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 39 0.19
UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:... 39 0.19
UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 38 0.44
UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:... 36 1.0
UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit... 36 1.3
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 36 1.8
UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1; Guill... 35 2.3
UniRef50_A0DT75 Cluster: Chromosome undetermined scaffold_62, wh... 35 2.3
UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein comple... 35 3.1
UniRef50_UPI0000DA2A79 Cluster: PREDICTED: similar to CG13731-PA... 34 5.4
UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative... 33 7.1
UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2; Dictyos... 33 7.1
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 33 9.4
UniRef50_Q4FP77 Cluster: AcrB/AcrD/AcrF family protein; n=2; Can... 33 9.4
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 33 9.4
UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit... 33 9.4
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 177 bits (431), Expect = 3e-43
Identities = 82/115 (71%), Positives = 94/115 (81%)
Frame = +1
Query: 133 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 312
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 313 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 477
+AL EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQA 120
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 153 bits (370), Expect = 7e-36
Identities = 70/125 (56%), Positives = 93/125 (74%)
Frame = +1
Query: 97 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 276
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 277 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKD 456
NC+EA YKKLV LC E+ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K
Sbjct: 56 NNCEEAMYKKLVTGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKH 115
Query: 457 FGEET 471
FG++T
Sbjct: 116 FGDDT 120
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 148 bits (359), Expect = 2e-34
Identities = 66/110 (60%), Positives = 87/110 (79%)
Frame = +1
Query: 148 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCN 327
+MDV+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLAE+C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCA 83
Query: 328 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 477
+H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET A
Sbjct: 84 DHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTA 133
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 121 bits (292), Expect(2) = 1e-33
Identities = 61/99 (61%), Positives = 72/99 (72%)
Frame = +1
Query: 97 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 276
+A EVEVP +G M V AL+ VL+ ALIH GL GL EAAKALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 277 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLC 393
E C+E AYKKLV ALC+EH+IPL+KV + K LGEW GLC
Sbjct: 72 EGCEEEAYKKLVVALCSEHKIPLIKVPDGKMLGEWVGLC 110
Score = 45.2 bits (102), Expect(2) = 1e-33
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1
Query: 394 KIDKDGKARKIVGCSCVVIKDFGEET 471
++D++G ARK+V CSCVV+KD+GEE+
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEES 169
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 143 bits (347), Expect = 4e-33
Identities = 62/107 (57%), Positives = 84/107 (78%)
Frame = +1
Query: 151 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 330
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALCNE
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCNE 65
Query: 331 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 471
H IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+
Sbjct: 66 HGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEES 112
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 141 bits (342), Expect = 2e-32
Identities = 68/118 (57%), Positives = 86/118 (72%), Gaps = 4/118 (3%)
Frame = +1
Query: 130 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAA 297
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 298 YKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 471
+ +LV+AL EH IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKES 123
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 140 bits (340), Expect = 3e-32
Identities = 74/141 (52%), Positives = 92/141 (65%), Gaps = 18/141 (12%)
Frame = +1
Query: 103 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 282
+ +E P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 283 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG------------------LCKIDKD 408
CD+ Y KLV+ALC EH + LV V + K LGEWAG LCKID +
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSE 122
Query: 409 GKARKIVGCSCVVIKDFGEET 471
GKARK+VGCSCVV+KD+GEE+
Sbjct: 123 GKARKVVGCSCVVVKDYGEES 143
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 126 bits (303), Expect = 1e-27
Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +1
Query: 97 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 270
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 271 LAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 450
LAE+C+E YK+LV+ALC E IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I
Sbjct: 61 LAESCEEDCYKQLVEALCRERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAI 120
Query: 451 KDFGEETPA 477
D+G E+ A
Sbjct: 121 VDYGVESEA 129
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 116 bits (280), Expect = 6e-25
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 5/130 (3%)
Frame = +1
Query: 97 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLC 267
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 268 VLAENCDEAAYKKLVQALCN--EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSC 441
VL + EA KLV+ L N E+++PL+KV + K+LGEWAGL KID++G ARK+VG S
Sbjct: 61 VLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASV 120
Query: 442 VVIKDFGEET 471
VV+K++G ET
Sbjct: 121 VVVKNWGAET 130
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 114 bits (274), Expect = 3e-24
Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Frame = +1
Query: 97 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 273
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 274 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVI 450
++ C E AYKKL+ LC E IPL V N+ K LG WAGL K+D +G ARKI+G S V +
Sbjct: 60 SDVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAV 119
Query: 451 KDFGEET 471
DFGE++
Sbjct: 120 VDFGEDS 126
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 109 bits (263), Expect = 7e-23
Identities = 51/104 (49%), Positives = 70/104 (67%)
Frame = +1
Query: 166 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 345
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL ++ I L
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDL 91
Query: 346 VKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 477
V +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T A
Sbjct: 92 VSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKA 135
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 98.7 bits (235), Expect = 2e-19
Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC EH +P +
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALCKEHGVPCI 110
Query: 349 KVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEET 471
+ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++
Sbjct: 111 ETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKS 153
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 85.0 bits (201), Expect = 2e-15
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL + QIP+
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQIPVW 73
Query: 349 KVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 468
KV+ LGEW G+ K K K CS V +K F E
Sbjct: 74 KVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 133 ILSGNNMDVNVALQEVLKTALIHGG-LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKL 309
+L + +D+N L +VL A H G LV + A A L NC+E Y KL
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKL 64
Query: 310 VQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPA 477
V+A C EHQI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A
Sbjct: 65 VKAHCAEHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQA 120
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 81.4 bits (192), Expect = 3e-14
Identities = 36/111 (32%), Positives = 64/111 (57%)
Frame = +1
Query: 136 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQ 315
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 316 ALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 468
ALC +++I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 61 ALCAKNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 76.2 bits (179), Expect = 1e-12
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C E + +V
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAICKEQGVKIV 85
Query: 349 KVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 450
V +LGEW CKI +DG A +I CSC ++
Sbjct: 86 MVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 68.9 bits (161), Expect = 2e-10
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 249
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 62.9 bits (146), Expect = 1e-08
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC E+++ L
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 349 KVDNNKKLGEWAG--LCKIDKDGKARKIVGCSCVVIKDF 459
K + LGE G C D D K K+V S VI +F
Sbjct: 70 KKFTRRTLGELTGQVRCLADSD-KIIKVVPASACVIHNF 107
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 59.7 bits (138), Expect = 9e-08
Identities = 44/134 (32%), Positives = 67/134 (50%)
Frame = -1
Query: 516 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCLAILVNLAETSPFSKLFVVVNLDQWN 337
+AR L+ VL+H +R FL E+ D + A N A V LA+TSP ++ + + +Q +
Sbjct: 295 VARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTERHRLRDANQVH 354
Query: 336 LMFVAQSLNKFLVCGFITVLSQNT*YCLPLVKSFSGFVKTVHKTTMD*SCL*HLLQCYIH 157
+ FVAQ L++ V + +L Q+ L + + +T +T S L H LQ
Sbjct: 355 VDFVAQRLDELGVISLVAILRQDADQSLAGLDRLARLAQTAVQTVARASLLQHNLQSRHE 414
Query: 156 VHVVTRQDGVGGDL 115
VH R GGDL
Sbjct: 415 VHRFIRHR--GGDL 426
>UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L7Ae,
putative - Trichomonas vaginalis G3
Length = 127
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/102 (28%), Positives = 49/102 (48%)
Frame = +1
Query: 160 NVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 339
N ++ L + G + G+ KA+ K + L +LA++ + YK LV LC +H +
Sbjct: 9 NQVIEAGLHQINLSGTVAKGIKCTIKAILKDKVQLVLLADDTENKDYKNLVAGLCKKHNV 68
Query: 340 PLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGE 465
L V+ + LG GL + DG R+ + C I +G+
Sbjct: 69 KLQAVEKKELLGRALGLTHLKADGSVRRQMNCGACAIIGYGK 110
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 54.0 bits (124), Expect = 5e-06
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +1
Query: 151 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 330
M + L+ ++K A +V G+ E K + + C+LA+NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLCWI 60
Query: 331 HQIPLVKVDNNKKLGEWAGLCKIDKDGK-ARKIVGCS-CVVIK 453
+++ + +++ KKLG + K K K + KI+ CS C++++
Sbjct: 61 YKVKIFIINDKKKLGRLCKILKRKKSTKHSFKIIPCSVCLILR 103
>UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S12
- Encephalitozoon cuniculi
Length = 134
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/107 (28%), Positives = 51/107 (47%)
Frame = +1
Query: 151 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNE 330
M + AL +V K + + L G E K + + ++AEN E KLV AL +
Sbjct: 13 MTLQEALSKVCKVSRTYCKLSRGAKETTKKMLADKMSFVMVAENA-EPRISKLVMALAKK 71
Query: 331 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 471
IP++ + + +LG G+ + GK R GC ++D+ E+T
Sbjct: 72 KNIPVISIGSCLELGRIVGVENVSSSGKVRS-KGCCVAGVQDYCEQT 117
>UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11086-PA - Tribolium castaneum
Length = 153
Score = 48.8 bits (111), Expect = 2e-04
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 NNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENC--DEAAYKK-- 306
N + ALQ VL A G L+ GL A L+ +LCVL + D + +
Sbjct: 16 NRNKLGRALQGVLTQAKTEGRLICGLLPAISCLENSLEDVLLCVLPQTRPGDATTHMQTV 75
Query: 307 LVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 450
L+QA C E+ IP+++VD+++KL ++ GL G VGC C VI
Sbjct: 76 LLQAFCFENYIPVIQVDSSEKLAQYCGL------GSR---VGCPCAVI 114
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 226 EAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVD 357
++AKA++ +QA VLA++C E YKKLV AL + QIP+ KV+
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVE 95
>UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 148
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +1
Query: 157 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAEN--CDEA--AYKKLVQA 318
+ + L++VL +A L+ H AA+ L D LCVL EN D + +L++A
Sbjct: 25 LQLCLEDVLNSARECNELIMTTHGAAEQLEMDPDDVTLCVLVENRHADPGIQVHCRLIEA 84
Query: 319 LCNEHQIPLVKVDNNKKLGEWAG 387
C E+ IP+VKVD+++KL AG
Sbjct: 85 FCWEYPIPVVKVDSSRKLKTIAG 107
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 175 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKV 354
E ++ A G + G +E KA+++ QA L ++AE+ + LC+E +IP V V
Sbjct: 21 EAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYV 80
Query: 355 DNNKKLGEWAGL 390
+ K LGE GL
Sbjct: 81 SSKKALGEACGL 92
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 154 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEH 333
DV E+L A G + G +E KA+++ A L ++AE+ D + LC E
Sbjct: 29 DVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEK 88
Query: 334 QIPLVKVDNNKKLGEWAGL 390
++P V V + +KLG+ AG+
Sbjct: 89 KVPYVYVPSKEKLGKAAGI 107
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 378
L+HG++E KA++++QA L V+A + + + ALC + IP V V + +LG+
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKLDIPYVIVKSKSRLGQ 191
>UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible
protein GADD45 alpha; n=72; Euteleostomi|Rep: Growth
arrest and DNA-damage-inducible protein GADD45 alpha -
Homo sapiens (Human)
Length = 165
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 157 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 312
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 313 QALCNEHQIPLVKVDNNKKLGE 378
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 627 DPDMIRYIDEFGQTTTXMQ 683
DPDMIRYIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 41.9 bits (94), Expect = 0.020
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 387
LV G + KAL++ + + V+A++ + K V+A+ + QIP++ VD+ KKLG+ G
Sbjct: 12 LVIGTKQTLKALEQEEVLEVVIAKDAEPRVVNK-VEAMASVKQIPIIYVDSMKKLGKACG 70
Query: 388 L 390
+
Sbjct: 71 I 71
>UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep:
Zgc:85869 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 155
Score = 41.5 bits (93), Expect = 0.027
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +1
Query: 166 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAEN----CDEAA--YKKLVQAL 321
AL+EVL +A + L G++E+AK + D CVLA + CD A + L+QA
Sbjct: 22 ALEEVLVSAKANDSLTIGVYESAKVMNVDPDSVSFCVLAVDEEFECDIALQIHFTLIQAF 81
Query: 322 CNEHQIPLVKVDNNKKLGEWAG 387
C ++ I +V+V++ ++L + G
Sbjct: 82 CFDNDISIVRVNDMQRLSDIVG 103
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 40.3 bits (90), Expect = 0.062
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 387
+V GL E +A++K+QA + V+A N D + LC ++IP V + +LG+ G
Sbjct: 133 VVTGLQEVTRAIEKKQARMVVIANNVDPVELVLWMPNLCRANKIPYAIVKDMARLGDAIG 192
>UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arrest
and DNA-damage-inducible, gamma; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to growth arrest and
DNA-damage-inducible, gamma - Canis familiaris
Length = 189
Score = 39.9 bits (89), Expect = 0.082
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +1
Query: 166 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YKKLVQAL 321
AL E+L +A G L G++E+AK L D CVLA + ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAADAEDEGDIALQIHFTLIQAF 84
Query: 322 CNEHQIPLVKVDNNKKLGEWAG 387
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 39.1 bits (87), Expect = 0.14
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCK 396
G + KAL K +A+ +A + ++ +V ALC E +P+ VD +LG+ G+
Sbjct: 15 GTKQTLKALQKGKAIKVFIALDAEKRVTDPVV-ALCKEKNVPVETVDTMAELGKSCGIA- 72
Query: 397 IDKDGKARKIVGCSCVVIKDFGEE 468
VGC+C I D G+E
Sbjct: 73 ----------VGCACAAIIDPGKE 86
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 387
++ G++E ++K++A L ++A + D + +LC++ QIP + + +LG AG
Sbjct: 110 VISGINEVTNLIEKKKAKLVLIANDVDPIELVMWLPSLCHKMQIPYAIIRSKSELGALAG 169
Query: 388 L 390
L
Sbjct: 170 L 170
>UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 161
Score = 38.7 bits (86), Expect = 0.19
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +1
Query: 157 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 336
+ V + ++++ A+ + L G++E K L+K + L +LA +CD + C E
Sbjct: 51 LTVKILDLIQQAMHYKQLKKGVNEVLKCLNKGVSELVILAADCDPLEIVMNLPGECEEKN 110
Query: 337 IPLVKVDNNKKLGEWAGL 390
+P V + LG G+
Sbjct: 111 VPYCFVSSKSALGRACGI 128
>UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Clostridium cellulolyticum H10|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Clostridium
cellulolyticum H10
Length = 80
Score = 38.7 bits (86), Expect = 0.19
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGL 390
G+ ++ KA++ A ++A +C++ + +++ LC +P+ VD+ K+LG+ G+
Sbjct: 13 GVKQSTKAVENGVASSVIIARDCEQRVVRGIIE-LCENKSVPITYVDSMKQLGKACGI 69
>UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:
ENSANGP00000021535 - Anopheles gambiae str. PEST
Length = 135
Score = 38.7 bits (86), Expect = 0.19
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 157 VNVALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENCDEA--AYKKLVQALC 324
+ ++ L A + GL E+ AL K + C LA + + A ++ L++A C
Sbjct: 5 IGATVRRALVAASREDRAIVGLSESINALSKTPEDFLFCFLAASGNPANHMHQVLLEAFC 64
Query: 325 NEHQIPLVKVDNNKKLGEWAGLCKID 402
EH I ++KVD+ +KL G +++
Sbjct: 65 FEHDIYIIKVDSAEKLSRMLGTPRVE 90
>UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 171
Score = 37.5 bits (83), Expect = 0.44
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 121 PTNPILSG-NNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAA 297
PT PI + ++ + +V+K A + G+ E KAL K +CV+A +
Sbjct: 38 PTAPIATPLADLKTTKKILKVVKKAAKAKQVRRGVKEVVKALKKETKGVCVIAGDISPID 97
Query: 298 YKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCK 396
V LC E +P V V + ++LG AG+ K
Sbjct: 98 VITHVPILCEEAGVPYVYVHSKEELGA-AGMTK 129
>UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:
NHP2-like protein - Drosophila melanogaster (Fruit fly)
Length = 127
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 349 KVDNNKKLGEWAGLCK 396
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Saccharomycetales|Rep: H/ACA ribonucleoprotein
complex subunit 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 156
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +1
Query: 157 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQ 336
+N + + +K A + G+ E KAL K + L V+A + A + LC +H
Sbjct: 39 LNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHS 98
Query: 337 IPLVKVDNNKKLGEWAGLCK 396
+P + + + + LG AG K
Sbjct: 99 VPYIFIPSKQDLGA-AGATK 117
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 387
LV G+ A++ ++A L ++A + D + ALC +IP V + +LG+ G
Sbjct: 122 LVQGIKNVTAAVESKKAQLVIIAHDVDPIELVIWLPALCRNLEIPYCIVKSKSRLGQIVG 181
Query: 388 L 390
+
Sbjct: 182 M 182
>UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1;
Guillardia theta|Rep: SNU13 snRNP subunit homolog -
Guillardia theta (Cryptomonas phi)
Length = 125
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 148 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCN 327
N ++ V + ++++ A + G +EA K + K + L VLA + D + LC
Sbjct: 12 NENLTVQILDLIEIASSFKLIKKGANEAVKNIKKGKVELLVLASDSDPIEIVLHLPLLCE 71
Query: 328 EHQIPLVKVDNNKKLGEWAGL 390
+ IP + +++ +G+ G+
Sbjct: 72 DRSIPYIFINSKISIGKACGI 92
>UniRef50_A0DT75 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 274
Score = 35.1 bits (77), Expect = 2.3
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 160 NVALQEV-LKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAENCDEAAYKKLVQALCNE 330
NVA++ V + T HGGLV LHE K K + E+ + Y +V CN+
Sbjct: 41 NVAIKAVAMSTFKNHGGLVGQLHETEKQNMKLVNSNYVVRFIEDFQQNKYSYIVMEYCNQ 100
Query: 331 HQIPLVKVDNNKKLGE 378
I +D NK E
Sbjct: 101 GDIEKPWLDQNKHFSE 116
>UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein complex
subunit 2-like protein; n=3; Chromadorea|Rep: Putative
H/ACA ribonucleoprotein complex subunit 2-like protein -
Caenorhabditis elegans
Length = 163
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
L G+ + K L + + +C+LA N + +C E +IP V + + ++LG
Sbjct: 69 LREGIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLG 124
>UniRef50_UPI0000DA2A79 Cluster: PREDICTED: similar to CG13731-PA;
n=1; Rattus norvegicus|Rep: PREDICTED: similar to
CG13731-PA - Rattus norvegicus
Length = 285
Score = 33.9 bits (74), Expect = 5.4
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 415 PCHPCQSCRDQPILQAFCCCQP*PVESDVRCTEPEQVSCMRLHHSSQPKHIVLLASCQ 242
P H C C P+ C P P+ + ++CT P +C++ +S + + + CQ
Sbjct: 196 PIHTCLQCTPPPVHTRLQCTLP-PIHTCLQCTLPPVHTCLQYTPASSARLLPVHTCCQ 252
>UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative;
n=1; Clostridium novyi NT|Rep: Ribosomal protein L7AE
family, putative - Clostridium novyi (strain NT)
Length = 80
Score = 33.5 bits (73), Expect = 7.1
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 196 IHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
I G V GL + K + + +A+N D +VQ L +P++ +D KKLG
Sbjct: 5 IQGEKVIGLKQTMKYIQNDKGKCLYVAKNADGKLTDPVVQ-LATNRLLPIIYIDTMKKLG 63
Query: 376 EWAGL 390
+ G+
Sbjct: 64 MFCGI 68
>UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L7a
- Dictyostelium discoideum AX4
Length = 285
Score = 33.5 bits (73), Expect = 7.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 378
G+ K ++K++A L V+A + D + LC +P V + +LGE
Sbjct: 158 GIDSVTKLIEKKKAKLVVIAHDVDPVELVLYLPTLCRRMDVPYCIVKSKSRLGE 211
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 33.1 bits (72), Expect = 9.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 372
L +GL+ ++ +QA L V+A + D + LC ++ +P V N++L
Sbjct: 224 LKYGLNHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGNRQL 278
>UniRef50_Q4FP77 Cluster: AcrB/AcrD/AcrF family protein; n=2;
Candidatus Pelagibacter ubique|Rep: AcrB/AcrD/AcrF family
protein - Pelagibacter ubique
Length = 1040
Score = 33.1 bits (72), Expect = 9.4
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 128 LVGTSTSTSAMVVDYLTVLRTGKKTIDQNLK 36
L+G ST S ++VDY LRT K I+ ++K
Sbjct: 924 LIGISTKNSILIVDYANQLRTAGKNIETSVK 954
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 33.1 bits (72), Expect = 9.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 154 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKL 309
D N AL+ L+T + H VHG K LD R+ VL + N E ++
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEI 161
>UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Oryza sativa|Rep: H/ACA ribonucleoprotein complex
subunit 2 - Oryza sativa subsp. indica (Rice)
Length = 126
Score = 33.1 bits (72), Expect = 9.4
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 208 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 387
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 21 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 79
Query: 388 LCK 396
K
Sbjct: 80 TTK 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,798,054
Number of Sequences: 1657284
Number of extensions: 14893231
Number of successful extensions: 39611
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 38243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39587
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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