Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C11
(867 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 202 7e-52
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 200 3e-51
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 200 3e-51
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 200 3e-51
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 69 8e-12
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 36 0.055
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 36 0.055
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 30 3.6
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 30 3.6
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 29 6.3
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 29 6.3
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 29 6.3
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 29 6.3
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 29 6.3
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 29 8.3
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 202 bits (492), Expect = 7e-52
Identities = 95/129 (73%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
Frame = +1
Query: 94 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 270
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+
Sbjct: 12 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCI 70
Query: 271 LAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 450
LAE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVI
Sbjct: 71 LAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVI 130
Query: 451 KDFGEETPA 477
KDFGEETPA
Sbjct: 131 KDFGEETPA 139
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 200 bits (487), Expect = 3e-51
Identities = 94/128 (73%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Frame = +1
Query: 97 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 273
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 274 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 453
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 454 DFGEETPA 477
DFGEETPA
Sbjct: 120 DFGEETPA 127
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 200 bits (487), Expect = 3e-51
Identities = 94/128 (73%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Frame = +1
Query: 97 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 273
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 274 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 453
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 454 DFGEETPA 477
DFGEETPA
Sbjct: 120 DFGEETPA 127
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 200 bits (487), Expect = 3e-51
Identities = 94/128 (73%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Frame = +1
Query: 97 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 273
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 274 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 453
AE+ DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 454 DFGEETPA 477
DFGEETPA
Sbjct: 120 DFGEETPA 127
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 68.9 bits (161), Expect = 8e-12
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 249
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.055
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 349 KVDNNKKLGEWAGLCK 396
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.055
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLV 348
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 349 KVDNNKKLGEWAGLCK 396
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 30.3 bits (65), Expect = 3.6
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAENCD-EAA---YKKLVQALCNE 330
++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 331 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 426
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 30.3 bits (65), Expect = 3.6
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = +1
Query: 169 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAENCD-EAA---YKKLVQALCNE 330
++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 331 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 426
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 217 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 375
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 260 YYVFWLRTVMKPHTRNLFRLCATNIRFHWS 349
YY +++ H+R+L RLC N++F W+
Sbjct: 314 YYRRFIKN-FSDHSRHLTRLCKKNVQFEWT 342
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,216,036
Number of Sequences: 53049
Number of extensions: 733804
Number of successful extensions: 1872
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1872
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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