Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C10
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841    186   2e-47
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245...   167   8e-42
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848...   162   3e-40
09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078...   127   1e-29
09_02_0366 + 7941550-7942161,7942230-7942775                           28   8.8  
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873...    28   8.8  

>09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841
          Length = 133

 Score =  186 bits (454), Expect = 2e-47
 Identities = 90/124 (72%), Positives = 102/124 (82%)
 Frame = +1

Query: 145 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 324
           IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LP
Sbjct: 10  IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLP 69

Query: 325 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXARLRS 504
           N F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN  ARLRS
Sbjct: 70  NKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRS 129

Query: 505 QENE 516
           QE+E
Sbjct: 130 QEDE 133


>09_04_0633 -
           19123930-19124009,19124240-19124344,19124453-19124543,
           19124647-19124709,19126318-19126368,19126878-19126962,
           19127102-19127283,19128493-19128582
          Length = 248

 Score =  167 bits (407), Expect = 8e-42
 Identities = 79/112 (70%), Positives = 92/112 (82%)
 Frame = +1

Query: 145 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 324
           IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LP
Sbjct: 10  IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLP 69

Query: 325 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 480
           N F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I ++
Sbjct: 70  NKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVIS 121


>08_02_1315 +
           26083856-26083945,26084093-26084226,26084753-26084819,
           26085011-26085192,26085315-26085444
          Length = 200

 Score =  162 bits (394), Expect = 3e-40
 Identities = 76/102 (74%), Positives = 87/102 (85%)
 Frame = +1

Query: 211 NWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNR 390
           +WR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LPN F+K +VHNV ELE+LMM NR
Sbjct: 99  SWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNR 158

Query: 391 KYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXARLRSQENE 516
            YCAEIAH VS+KKRK IVERA QL I VTN  ARLRSQE+E
Sbjct: 159 TYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 200


>09_04_0630 +
           19104678-19105463,19106169-19106348,19107775-19107864,
           19108777-19108958,19109968-19109974,19111763-19111833,
           19112188-19112224,19112433-19112603
          Length = 507

 Score =  127 bits (306), Expect = 1e-29
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = +1

Query: 145 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 324
           IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LP
Sbjct: 332 IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLP 391

Query: 325 NGFRKVLVHNVKELEILMMQNR 390
           N F+K +VHNV ELE+LMM NR
Sbjct: 392 NKFKKFVVHNVSELELLMMHNR 413


>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = -2

Query: 505 GSGGERPHSSL*C*AAGLFPRSASASSKRHHERSLRSTSCFASSRFPAL*HCELGPYGIH 326
           G+GGE    S+      L+P   S+   +HH     S+S  +S+   A  H   G  G H
Sbjct: 27  GAGGEEDDQSMLL--LSLWPPGHSSHHHQHHHHGAASSSACSSASISAAAHSG-GGGGGH 83

Query: 325 LGAYDGSSCW 296
             A   +S W
Sbjct: 84  GAAAAAASSW 93


>01_06_1513 -
           37884198-37884485,37884966-37886951,37886976-37887305,
           37887397-37887471,37887543-37887734,37887922-37888173,
           37888248-37888803,37888881-37889088,37889624-37889736,
           37890029-37890060,37890545-37890619
          Length = 1368

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = +1

Query: 205 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVL---VHNVKEL--- 366
           + N +K +G D   +    G    P      ++K+R +  NGFRKV     HN   L   
Sbjct: 248 RENKQKVKGSDPVKKTTHVGD--KPRCDVQESEKSRRVGNNGFRKVCFWQFHNFHMLLGS 305

Query: 367 EILMMQNRKYCAEIAH 414
           ++L+  N KY A   H
Sbjct: 306 DLLIFSNEKYMAVSLH 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,420
Number of Sequences: 37544
Number of extensions: 288960
Number of successful extensions: 882
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)