Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C10
         (899 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   230   2e-60
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   230   2e-60
BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   230   2e-60
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   230   2e-60
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   230   2e-60
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   230   2e-60
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   230   2e-60
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   173   3e-43
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    59   9e-09

>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 126

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 127 RLRSQENE 134


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 126

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 127 RLRSQENE 134


>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 20  YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 79

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 80  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 139

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 140 RLRSQENE 147


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 126

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 127 RLRSQENE 134


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 126

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 127 RLRSQENE 134


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 126

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 127 RLRSQENE 134


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  230 bits (562), Expect = 2e-60
 Identities = 105/128 (82%), Positives = 114/128 (89%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYGSNK+TR
Sbjct: 20  YRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTR 79

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAXA 492
           HMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   
Sbjct: 80  HMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNG 139

Query: 493 RLRSQENE 516
           RLRSQENE
Sbjct: 140 RLRSQENE 147


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  173 bits (421), Expect = 3e-43
 Identities = 81/114 (71%), Positives = 93/114 (81%)
 Frame = +1

Query: 133 YRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTR 312
           YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNIGYGSNK+TR
Sbjct: 7   YRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYGSNKRTR 66

Query: 313 HMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 474
           HMLP GF+K LVHNV+ELE+L+MQN +   E+    S  + K I+ERA+QLS+R
Sbjct: 67  HMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = +3

Query: 231 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVLRRDR 410
           Y QQS   +QG++ DAQH LR +Q  P +A   I   P +Q  RAG    A+  +LRRDR
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPRLLRRDR 66

Query: 411 SWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*INI 524
              L +EA+ D     AA     +  RSP    E +++
Sbjct: 67  PRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVSL 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,666,160
Number of Sequences: 53049
Number of extensions: 484650
Number of successful extensions: 1463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)