Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C09
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65390.2 68414.m07419 disease resistance protein (TIR class),... 31 0.85
At1g65390.1 68414.m07420 disease resistance protein (TIR class),... 31 0.85
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 30 2.0
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 30 2.0
At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putati... 29 4.5
At5g37550.1 68418.m04522 expressed protein 28 6.0
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 28 6.0
At4g32950.1 68417.m04688 protein phosphatase 2C, putative / PP2C... 28 7.9
>At1g65390.2 68414.m07419 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +3
Query: 198 YYLRIFIRSRTTGPQIGMFWMLTSSYQKRLS*LIRWRAATASITRGMRMVRTSYGIHAGD 377
Y L + + TG FW L YQ L +W A S+ ++ + D
Sbjct: 114 YRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCELFSLILPKHS-DISD 172
Query: 378 SEFTXQLV*ARRFLQSNIIQRHH 446
+F +V A + +Q N QR +
Sbjct: 173 RDFVKSIVKAVKKVQKNFFQRRN 195
>At1g65390.1 68414.m07420 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 411
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +3
Query: 198 YYLRIFIRSRTTGPQIGMFWMLTSSYQKRLS*LIRWRAATASITRGMRMVRTSYGIHAGD 377
Y L + + TG FW L YQ L +W A S+ ++ + D
Sbjct: 114 YRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCELFSLILPKHS-DISD 172
Query: 378 SEFTXQLV*ARRFLQSNIIQRHH 446
+F +V A + +Q N QR +
Sbjct: 173 RDFVKSIVKAVKKVQKNFFQRRN 195
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +2
Query: 65 TITDDASKELTIDVNPVANFSISGNQLPNITIHVSRDKLNDGEMILFTHFYKI-TNYGSS 241
++ S+ L A F + GN+ P+I I + N G++ H ++ G
Sbjct: 195 SVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITSKLHVIELGAQPGKP 254
Query: 242 NWHVLDADIIIPEKIELIDSLEGCHSINHTWN 337
++ AD+ P + D ++H +N
Sbjct: 255 SFTKKQADLFFPP--DFADDFPVAMQVSHKFN 284
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +2
Query: 65 TITDDASKELTIDVNPVANFSISGNQLPNITIHVSRDKLNDGEMILFTHFYKI-TNYGSS 241
++ S+ L A F + GN+ P+I I + N G++ H ++ G
Sbjct: 195 SVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITSKLHVIELGAQPGKP 254
Query: 242 NWHVLDADIIIPEKIELIDSLEGCHSINHTWN 337
++ AD+ P + D ++H +N
Sbjct: 255 SFTKKQADLFFPP--DFADDFPVAMQVSHKFN 284
>At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase (04C11)
[gi:6650208] [PMID:11247608]; similar to beta-Amyrin
Synthase GI:3688600 from [Panax ginseng]
Length = 767
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 THFYKITNY-GSSNWHVLDADIIIPEKIELIDSLEGCHSINHT 331
TH + NY G W DAD PE++ +D SIN +
Sbjct: 14 THLFTTNNYTGRQTWE-FDADACSPEELAEVDEARQNFSINRS 55
>At5g37550.1 68418.m04522 expressed protein
Length = 230
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 522 RSXNGSRIKXWDSTIYLDXSGAARCSGDVELCWI 421
RS N SR K W T++ G GD EL +
Sbjct: 22 RSRNNSRKKRWSPTLFAGGGGGRGGGGDDELATV 55
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 468 DLNKSLNPTX*FWXRSXIWXX*WVGGRFMVLAALCSIYKXGSLQXTKDX*XWFXXNKGG 644
DLN S++ T + R+ I+ +G ++LAA+C + + TK +F N GG
Sbjct: 326 DLNSSMSCTRPEYKRTRIFLVIIIGVLVLLLAAICIQHATKQRKYTKLRRQFFEQNGGG 384
>At4g32950.1 68417.m04688 protein phosphatase 2C, putative / PP2C,
putative phosphoprotein phosphatase, Arabidopsis
thaliana, PIR2:S55457
Length = 326
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 206 THFYKITNYGSSNWHVLDADIIIPEKIELIDSLEGCHSIN 325
+ Y+IT+YG N + ++P+ + + SL G +N
Sbjct: 16 SQIYEITDYGQENAVLYSDHHVVPQNLGSVSSLAGGKGLN 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,528,379
Number of Sequences: 28952
Number of extensions: 269483
Number of successful extensions: 431
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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