Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C07
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    32   0.50 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.7  
03_06_0471 + 34169562-34169892,34170121-34170347                       29   3.6  
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626...    29   4.7  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   6.2  
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56...    28   8.2  
04_03_1022 - 21778315-21779007                                         28   8.2  

>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
            22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -3

Query: 229  AVSIRVVVFGRINDVRAVVNRFVAVSLSVGHSQQSEDENHEEFHFYMITSYHRRK 65
            A  I  +++G ++D     ++F+ +S       QS+DEN +  H  +  +YH +K
Sbjct: 985  ACDIIRILYGEVHDHSPFDDKFLPLSFDAQIDSQSDDENDKSGHGRIKGNYHSKK 1039


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
 Frame = -3

Query: 658  PXXEGGGGXPPPXXVFXXWGPXXP-----XXXGXPPPXPXG 551
            P  EG GG PPP  V    GP  P        G PPP   G
Sbjct: 1140 PLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHG 1180


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/47 (38%), Positives = 19/47 (40%)
 Frame = +2

Query: 161 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGPTLLQAYP 301
           Y P    P    PP  Y P+  GY P   GAY   PP G      YP
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYP 96


>10_08_0683 -
           19860777-19861070,19861677-19861874,19862498-19862659,
           19862763-19862911,19863089-19863236,19863317-19863385,
           19863471-19863719,19863937-19864131,19864444-19864560,
           19864978-19866537
          Length = 1046

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
 Frame = +3

Query: 624 GGGXP-PPPSXXGXKXXXFXXXXXPPXXXPPPP 719
           GGG P PPP         +     PP   PPPP
Sbjct: 8   GGGYPYPPPQQYPYPYGQYPYQYPPPQQQPPPP 40


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +2

Query: 218  NGNGYE-----PIDNGAYYVDPPQGPTLLQAYPFP 307
            +GN Y      P  N AY++ PP  P     YP+P
Sbjct: 1189 HGNNYHQPPSVPPPNNAYHLQPPPHPPFPNQYPYP 1223


>08_01_0080 +
           566509-566746,566904-567151,567347-567532,567639-567734,
           567836-567907,567990-568106,570531-571676
          Length = 700

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 197 PPKDYNPNGNG---YE-PIDNGAYYVDPPQGPTLLQAYP 301
           PP++Y P G G   Y  P  N  YY  PP GP   Q YP
Sbjct: 452 PPQNYGP-GYGDPRYNAPAPNQQYYGQPPAGPQ--QGYP 487


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/38 (31%), Positives = 13/38 (34%)
 Frame = +3

Query: 636 PPPPSXXGXKXXXFXXXXXPPXXXPPPPXXXPXXXXXP 749
           PPPP+              PP   PPPP   P     P
Sbjct: 18  PPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPHLLPP 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,972,238
Number of Sequences: 37544
Number of extensions: 618886
Number of successful extensions: 1782
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)