Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C07
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.60
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.0
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 2.4
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.5
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.3
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 7.3
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 7.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 28 9.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.7
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 9.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.7
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 138 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRP 284
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 138 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRP 284
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 658 PXXEGGGGXPPPXXVFXXW-GPXXPXXXGXPPPXP 557
P G GG PPP +F P P G PPP P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 534 PXXXXXPXGXGGGXPFXXGXXGPXXXKTXXGGGXPPPPSXXGXKXXXFXXXXXPPXXXPP 713
P P G P G G GG PPPP G PP PP
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP--PPP 118
Query: 714 PP 719
PP
Sbjct: 119 PP 120
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -3
Query: 640 GGXPPPXXVFXXWGPXXPXXXGXPPPXP 557
GG PPP + P P PPP P
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 126 LCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 251
LC+LW L T T TT T+ + TTT + +TTV
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTV 220
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 144 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 272
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 156 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRP 284
T+T TT T TTT T T +T T T+P P
Sbjct: 91 TSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNP 133
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 144 TLKETATNLLTTARTSLILPKT---TTLMETATNLSTTVHITWTLPKG 278
T A N+ TT T+ I P T TT++ T T ++TT +P G
Sbjct: 31 TTTSPAPNITTTTTTTTIAPPTNTTTTILTTTTTVTTTTTSPPLIPDG 78
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 144 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKGRPYFKPTP 302
T T T TT T+ P TTT T T T P+G F TP
Sbjct: 62 TSTSTPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQGYTSFLRTP 114
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 141 PTLKETATNLLTTARTSLILPKTTTLMET---ATNLSTTVHITWTLPKGRPY---FKPTP 302
PT AT +TT T+ P TTT+ T A ++TT I T+P + + KP P
Sbjct: 191 PTTTTIATTRITTKTTTSPPPFTTTVTTTTSAARTIATTTPIK-TVPPVKVFGKAIKPIP 249
Query: 303 FPG 311
PG
Sbjct: 250 TPG 252
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/100 (26%), Positives = 28/100 (28%)
Frame = -3
Query: 832 GFFFXGKXXXXPPPPXGXXKKKKKXXXXGXXXXXGXXXGGGGXXXGGXXXXXXKXXXXPX 653
G F G PPP G ++ GGGG G P
Sbjct: 121 GSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGG-----PP 175
Query: 652 XEGGGGXPPPXXVFXXWGPXXPXXXGXPPPXPXGXXXXXG 533
GG G PP GP G PPP G G
Sbjct: 176 GHGGMGGPPGHG--GQGGPPGHGGMGGPPPGQGGPGGPGG 213
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/100 (26%), Positives = 28/100 (28%)
Frame = -3
Query: 832 GFFFXGKXXXXPPPPXGXXKKKKKXXXXGXXXXXGXXXGGGGXXXGGXXXXXXKXXXXPX 653
G F G PPP G ++ GGGG G P
Sbjct: 401 GSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGG-----PP 455
Query: 652 XEGGGGXPPPXXVFXXWGPXXPXXXGXPPPXPXGXXXXXG 533
GG G PP GP G PPP G G
Sbjct: 456 GHGGMGGPPGHG--GQGGPPGHGGMGGPPPGQGGPGGPGG 493
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 658 PXXEGGGGXPPPXXVFXXWGPXXPXXXGXPPPXPXG 551
P G G PPP G P G PPP P G
Sbjct: 247 PPLAGSGSPPPPPAA----GSPPPPRTGSPPPPPTG 278
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 624 GGGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G G PPPP G PP PPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G PPPP+ PP PPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 658 PXXEGGGGXPPPXXVFXXWGPXXPXXXGXPPPXPXG 551
P G G PPP G P G PPP P G
Sbjct: 268 PPLAGSGSPPPPPAA----GSPPPPRTGSPPPPPTG 299
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 624 GGGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G G PPPP G PP PPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G PPPP+ PP PPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 658 PXXEGGGGXPPPXXVFXXWGPXXPXXXGXPPPXPXG 551
P G G PPP G P G PPP P G
Sbjct: 253 PPLAGSGSPPPPPAA----GSPPPPRTGSPPPPPTG 284
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 624 GGGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G G PPPP G PP PPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXFXXXXXPPXXXPPPP 719
G PPPP+ PP PPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 141 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT---LPKGRPYFKPT 299
PT TTA T++ PK TT + T T +TTV T T P+G F+PT
Sbjct: 169 PTTTTVRKTTQTTA-TTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLFEPT 221
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 636 PPPPSXXGXKXXXFXXXXXPPXXXPPPPXXXP 731
PPPP + + PP PPPP P
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 748 GXXXXXGXXXGGGGXXXGGXXXXXXKXXXXPXXEGGGGXPP 626
G G GGGG GG GGGG PP
Sbjct: 830 GYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPP 870
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 851 PPXGGGGFFFXXXXGXXPPPPP 786
P GGGG + G PPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPP 101
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 198 LPKTTTLMETATNLSTTVHITWTLPKGRPYFKPTPFPGAR 317
+P T E A+ + T++ T PK P +P P PG R
Sbjct: 23 IPPTVFRFEKASKIGTSLDTT---PKELPIRRPVPLPGPR 59
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 198 LPKTTTLMETATNLSTTVHITWTLPKGRPYFKPTPFPGAR 317
+P T E A+ + T++ T PK P +P P PG R
Sbjct: 23 IPPTVFRFEKASKIGTSLDTT---PKELPIRRPVPLPGPR 59
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXF--XXXXXPPXXXPPPPXXXP 731
GG PPPP G PP PPPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXF--XXXXXPPXXXPPPPXXXP 731
GG PPPP G PP PPPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 164 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 250
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +3
Query: 624 GGGXPPPPSXXGXKXXXFXXXXXPPXXXPPPPXXXPXXXXXPXXXXFFFFXXXPXGGGGX 803
GG PPPP G P PPPP P F P G G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG--PGAYGPPPTGFPPVGAPPPGAAGA 464
Query: 804 XXXXPXKKKP 833
P + P
Sbjct: 465 PGGNPFARGP 474
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 627 GGXPPPPSXXGXKXXXF--XXXXXPPXXXPPPPXXXP 731
GG PPPP G PP PPPP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,441,394
Number of Sequences: 27780
Number of extensions: 393982
Number of successful extensions: 1327
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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