Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C06
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 97 4e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 85 2e-15
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.037
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.086
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;... 35 3.2
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 35 3.2
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q5B5Q9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 97.5 bits (232), Expect = 4e-19
Identities = 53/73 (72%), Positives = 54/73 (73%)
Frame = +1
Query: 484 SKRPGTVXRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYXDTRRFPLEAPSCALPGXR 663
SK+ T R RFSIGSAPLTSITKIDAQV GGETRQDY DTRRFPLEAPSCAL R
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL-FR 60
Query: 664 PWPPYRDTCPAFS 702
P DTCP FS
Sbjct: 61 PC-RLPDTCPPFS 72
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 85.4 bits (202), Expect = 2e-15
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = +1
Query: 502 VXRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYXDTRRFPLEAPSCAL 651
V PR RFSIGSAPLTSITK DAQ+ GGETRQDY DTRRFPL APSCAL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 82.2 bits (194), Expect = 2e-14
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = +1
Query: 508 RPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYXDTRRFPLEAPSCAL 651
RPR RFSIGSAPLTSI K DAQ+ GGETRQDY D RRFPL APSCAL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 413
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 449
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 93 DPDMIRYIDEFGQTTTRMQ 149
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 217 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 339
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.9 bits (89), Expect = 0.086
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +1
Query: 451 IXQERTCEXKASKRPGTVXRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYXDTRRFPL 630
I +R + + P T F S PLT+ITKI Q +T+ +Y T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 631 EAPSCAL 651
++PS +L
Sbjct: 104 QSPSYSL 110
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 211
Score = 34.7 bits (76), Expect = 3.2
Identities = 30/85 (35%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = -1
Query: 759 RTRLEGMEEKAPNGFPERGRKGGTGIPVRRPGSXTRE-SARGSFQGETPGIXIVLSGFAT 583
R EG + K P G R + G G R G RE AR S + I A
Sbjct: 66 RAAKEGEKGKLPLGGRRRRSETGRGTAGGREGGKRRERGARSSSRHRPRQIRGRGEAQAR 125
Query: 582 XDLSVDFCDARQGGGAYGKTPATRP 508
DA QGG A GK PA RP
Sbjct: 126 PRQEASGDDATQGGRARGKPPAARP 150
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 34.7 bits (76), Expect = 3.2
Identities = 27/60 (45%), Positives = 29/60 (48%)
Frame = -2
Query: 557 MLVRGAEPMEKRQQRGLXTVPGLLLAFXSHVLSCXXXXXXXXXXXXXLSELIPLAAAERP 378
MLVRGAEPMEKR + L V LL + LSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLTCSFRL----YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 251 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 87
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q5B5Q9 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 531
Score = 33.1 bits (72), Expect = 9.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 671 RLTGIPVPPFLPLSGKPLGAFSSIPSSLVRISXFRLLRSFXSQXWGLVCP 820
R + IPV P P S P F+ IP S++ S +RL R + L CP
Sbjct: 247 RSSSIPVMP--PQSSNPANTFTQIPVSVLLQSGYRLCRQSGALARSLQCP 294
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,937,083
Number of Sequences: 1657284
Number of extensions: 14466755
Number of successful extensions: 40267
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40239
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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