Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C06
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0576 - 5114636-5115151,5115254-5116183,5116898-5117614,511...    29   3.8  
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778...    29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>08_01_0576 -
           5114636-5115151,5115254-5116183,5116898-5117614,
           5119630-5119746,5119930-5120295,5121365-5121634
          Length = 971

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 662 DPGRLTGIPVPPFLPLSGKPLGAFSSIPSSLV 757
           DPGR T +PVPP+    G+PL   +  P+S++
Sbjct: 522 DPGRTT-MPVPPWQQTIGQPLRVQAPQPASIL 552


>11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,
            7782225-7782324,7782720-7782801,7782928-7782940,
            7783621-7783681
          Length = 1433

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/47 (42%), Positives = 23/47 (48%)
 Frame = +3

Query: 534  RLRPPDEHHKNRRSSXRWRNPTGL*XYQAFPPGSSLVRSPWXPTLAA 674
            R RP  E   +  SS RWRNPT +     F     L+RS   P LAA
Sbjct: 1333 RHRPLTEGSPHPLSSARWRNPTKM--QGMFMHKDLLLRSRKNPILAA 1377


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,984,808
Number of Sequences: 37544
Number of extensions: 436282
Number of successful extensions: 1271
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)