Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C06
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003573-1|AAO39577.1|  952|Drosophila melanogaster LD40351p pro...    31   2.1  
AY070555-1|AAL48026.1|  952|Drosophila melanogaster LD31046p pro...    31   2.1  
AY069847-1|AAL39992.1|  778|Drosophila melanogaster SD09611p pro...    31   2.1  
AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil ...    31   2.1  
AE014297-3107|AAF55958.2|  952|Drosophila melanogaster CG31163-P...    31   2.1  
AE014297-3106|ABI31193.1| 1056|Drosophila melanogaster CG31163-P...    31   2.1  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    29   8.6  

>BT003573-1|AAO39577.1|  952|Drosophila melanogaster LD40351p
           protein.
          Length = 952

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -1

Query: 714 PERGRKGGTGIPVRRPGSXTRESARGSFQGETPGIXIVLSGFATXDLSVDFCDARQG--G 541
           P++     T IP+    S  RES  G + G    +  V S F+T  +  + C AR     
Sbjct: 447 PQQPPNPPTIIPLTHARSHDRES--GDYAGSISDLQSVTSRFSTVSIGTNNCTARYRTLS 504

Query: 540 GAYGKTPATRP 508
           G  G++P+  P
Sbjct: 505 GGIGESPSLSP 515


>AY070555-1|AAL48026.1|  952|Drosophila melanogaster LD31046p
           protein.
          Length = 952

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -1

Query: 714 PERGRKGGTGIPVRRPGSXTRESARGSFQGETPGIXIVLSGFATXDLSVDFCDARQG--G 541
           P++     T IP+    S  RES  G + G    +  V S F+T  +  + C AR     
Sbjct: 447 PQQPPNPPTIIPLTHARSHDRES--GDYAGSISDLQSVTSRFSTVSIGTNNCTARYRTLS 504

Query: 540 GAYGKTPATRP 508
           G  G++P+  P
Sbjct: 505 GGIGESPSLSP 515


>AY069847-1|AAL39992.1|  778|Drosophila melanogaster SD09611p
           protein.
          Length = 778

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -1

Query: 714 PERGRKGGTGIPVRRPGSXTRESARGSFQGETPGIXIVLSGFATXDLSVDFCDARQG--G 541
           P++     T IP+    S  RES  G + G    +  V S F+T  +  + C AR     
Sbjct: 273 PQQPPNPPTIIPLTHARSHDRES--GDYAGSISDLQSVTSRFSTVSIGTNNCTARYRTLS 330

Query: 540 GAYGKTPATRP 508
           G  G++P+  P
Sbjct: 331 GGIGESPSLSP 341


>AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil Y
           protein protein.
          Length = 939

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = -1

Query: 810 RPQXWEXNDRNN-RXLEIRTRLEGMEEKAPNGFPERGRKGGTGIPVRRPGSXTRESARGS 634
           R Q  E N  N  + LE+     G  + A  G  E  + G        PG    +S  GS
Sbjct: 529 RDQGAEKNGSNEAKPLEVPKSGAGSAQAASPGL-EVPKSGAGSAQAASPGLEVPKSGAGS 587

Query: 633 FQGETPGIXIVLSG 592
            Q  TPG+ +  SG
Sbjct: 588 AQAATPGLEVPKSG 601


>AE014297-3107|AAF55958.2|  952|Drosophila melanogaster CG31163-PB,
           isoform B protein.
          Length = 952

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -1

Query: 714 PERGRKGGTGIPVRRPGSXTRESARGSFQGETPGIXIVLSGFATXDLSVDFCDARQG--G 541
           P++     T IP+    S  RES  G + G    +  V S F+T  +  + C AR     
Sbjct: 447 PQQPPNPPTIIPLTHARSHDRES--GDYAGSISDLQSVTSRFSTVSIGTNNCTARYRTLS 504

Query: 540 GAYGKTPATRP 508
           G  G++P+  P
Sbjct: 505 GGIGESPSLSP 515


>AE014297-3106|ABI31193.1| 1056|Drosophila melanogaster CG31163-PD,
           isoform D protein.
          Length = 1056

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -1

Query: 714 PERGRKGGTGIPVRRPGSXTRESARGSFQGETPGIXIVLSGFATXDLSVDFCDARQG--G 541
           P++     T IP+    S  RES  G + G    +  V S F+T  +  + C AR     
Sbjct: 551 PQQPPNPPTIIPLTHARSHDRES--GDYAGSISDLQSVTSRFSTVSIGTNNCTARYRTLS 608

Query: 540 GAYGKTPATRP 508
           G  G++P+  P
Sbjct: 609 GGIGESPSLSP 619


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
            isoform protein.
          Length = 5554

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +2

Query: 611  IPGVSPWKLPRALSLVXDPGRLTGIPVPPFLPLSGKPLGAFSS 739
            IP +SP   PR   LV  PG ++G  VPPF   S   LGA+ S
Sbjct: 5130 IPNISPQSQPRVSPLVLPPG-ISG--VPPF-DASLHDLGAYVS 5168


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
            isoform A protein.
          Length = 5560

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +2

Query: 611  IPGVSPWKLPRALSLVXDPGRLTGIPVPPFLPLSGKPLGAFSS 739
            IP +SP   PR   LV  PG ++G  VPPF   S   LGA+ S
Sbjct: 5136 IPNISPQSQPRVSPLVLPPG-ISG--VPPF-DASLHDLGAYVS 5174


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,975,122
Number of Sequences: 53049
Number of extensions: 682474
Number of successful extensions: 1710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)