Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C04
(863 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 128 6e-30
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 71 1e-12
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 69 5e-12
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 66 3e-11
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 66 3e-11
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 64 9e-11
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 59 4e-09
At5g13650.2 68418.m01585 elongation factor family protein contai... 50 2e-06
At5g13650.1 68418.m01584 elongation factor family protein contai... 50 2e-06
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 47 1e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 45 6e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 45 6e-05
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 33 0.25
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 32 0.57
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 32 0.57
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 32 0.57
At2g27035.1 68415.m03248 plastocyanin-like domain-containing pro... 30 1.7
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 3.0
At1g75800.1 68414.m08805 pathogenesis-related thaumatin family p... 29 4.0
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 29 5.3
At1g66310.1 68414.m07530 F-box family protein contains F-box dom... 29 5.3
At4g22740.2 68417.m03281 glycine-rich protein 28 7.0
At4g22740.1 68417.m03280 glycine-rich protein 28 7.0
At3g51080.1 68416.m05593 zinc finger (GATA type) family protein ... 28 7.0
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 28 7.0
At4g10070.1 68417.m01647 KH domain-containing protein DNA-direct... 28 9.2
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 128 bits (308), Expect = 6e-30
Identities = 67/102 (65%), Positives = 80/102 (78%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
VDHGKSTLTDSLV+ AGIIA AG+ R TDTR DE +R ITIKST IS+++E+ ++ L
Sbjct: 28 VDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDESLK 87
Query: 379 FITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
T R+ +E +LINLIDSPGHVDFSSEVTAALR+TDGA
Sbjct: 88 SFTG--ARDGNE--YLINLIDSPGHVDFSSEVTAALRITDGA 125
Score = 102 bits (244), Expect = 4e-22
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +2
Query: 545 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGP 724
TETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 139 TETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDP--L 196
Query: 725 MGEVRVDPSKGSVGFGSGLHGWAFT 799
+G+V+V P KG+V F +GLHGWAFT
Sbjct: 197 LGDVQVYPEKGTVAFSAGLHGWAFT 221
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 135 DEIRGMMDKKRNIRNMSVIAH 197
DE+R +MD K NIRNMSVIAH
Sbjct: 7 DELRRIMDYKHNIRNMSVIAH 27
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 70.9 bits (166), Expect = 1e-12
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 199 VDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKD 372
VDHGK+TL D L+ S G++ AG+ RF D +EQ R IT+KS++IS+ +
Sbjct: 18 VDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSSISLKY------ 71
Query: 373 LVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
K + +NLIDSPGH+DF SEV+ A R++DGA
Sbjct: 72 --------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGA 101
Score = 41.5 bits (93), Expect = 7e-04
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 24/108 (22%)
Frame = +2
Query: 545 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD--- 715
T VLRQA E++ P L +NK+DR Y RIV VN I++ Y +
Sbjct: 115 THAVLRQAWIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYL 174
Query: 716 -------GGPMG--------------EVRVDPSKGSVGFGSGLHGWAF 796
P G EV P KG+V F L GW F
Sbjct: 175 SDVDSILASPSGELSAESLELLEDDEEVTFQPQKGNVVFVCALDGWGF 222
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 68.5 bits (160), Expect = 5e-12
Identities = 40/102 (39%), Positives = 60/102 (58%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF+E + +D
Sbjct: 75 IDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMFYENKVED-- 129
Query: 379 FITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
+ G+L+NLID+PGHVDFS EV+ +L GA
Sbjct: 130 ---------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGA 162
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRCITIKSTAISMFFELEEK 369
+ HGK+ D LV + ++ A + +TDTR DEQ+R I+IK+ +S+ E
Sbjct: 147 LQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSLVLE---- 202
Query: 370 DLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
D R KS +L N++D+PGHV+FS E+TA+LR+ DGA
Sbjct: 203 --------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGA 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = +2
Query: 545 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGP 724
TE +R AI + + ++ +NK+DR Y + +E +N I+ + G
Sbjct: 250 TERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGD 309
Query: 725 MGEVRVDPSKGSVGFGSGLHGWAFTPQT 808
+ +DP+ G+V F SG GW+FT Q+
Sbjct: 310 LP--LIDPAAGNVCFASGTAGWSFTLQS 335
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRCITIKSTAISMFFELEEK 369
+ HGK+ D LV + ++ A + +TDTR DEQ+R I+IK+ +S+ E
Sbjct: 147 LQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSLVLE---- 202
Query: 370 DLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
D R KS +L N++D+PGHV+FS E+TA+LR+ DGA
Sbjct: 203 --------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGA 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = +2
Query: 545 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGP 724
TE +R AI + + ++ +NK+DR Y + +E +N I+ + G
Sbjct: 250 TERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGD 309
Query: 725 MGEVRVDPSKGSVGFGSGLHGWAFTPQT 808
+ +DP+ G+V F SG GW+FT Q+
Sbjct: 310 LP--LIDPAAGNVCFASGTAGWSFTLQS 335
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRCITIKSTAISMFFELEEK 369
+ HGK+ D LV + ++ A R+TDTR DEQ+R I+IK+ +S+ E
Sbjct: 133 LQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISIKAVPMSLVLE---- 188
Query: 370 DLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
D R KS +L N++D+PG+V+FS E+TA+LR+ DGA
Sbjct: 189 --------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLADGA 222
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +2
Query: 545 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGP 724
TE +R AI + + ++ +NK+DR Y + +E +N I+ + +
Sbjct: 236 TERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISAASTNAAD 295
Query: 725 MGEVRVDPSKGSVGFGSGLHGWAFTPQT 808
+ +DP+ G+V F SG GW+FT Q+
Sbjct: 296 LP--LIDPAAGNVCFASGTAGWSFTLQS 321
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 58.8 bits (136), Expect = 4e-09
Identities = 39/102 (38%), Positives = 53/102 (51%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
+DHGKSTL D L+ G + R + +F D E++R ITIK A M + E+
Sbjct: 95 IDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARMRYVYEDTP-- 151
Query: 379 FITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
F +NLID+PGHVDFS EV+ +L +GA
Sbjct: 152 --------------FCLNLIDTPGHVDFSYEVSRSLAACEGA 179
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/101 (32%), Positives = 49/101 (48%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
VDHGK+TL DS++ +A + + + R D+ E++R ITI S S+ +
Sbjct: 92 VDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSITY-------- 143
Query: 379 FITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 501
K +N+ID+PGH DF EV L + DG
Sbjct: 144 ------------KNTKVNIIDTPGHSDFGGEVERVLNMVDG 172
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/101 (32%), Positives = 49/101 (48%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
VDHGK+TL DS++ +A + + + R D+ E++R ITI S S+ +
Sbjct: 91 VDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSITY-------- 142
Query: 379 FITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 501
K +N+ID+PGH DF EV L + DG
Sbjct: 143 ------------KNTKVNIIDTPGHSDFGGEVERVLNMVDG 171
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKSTAISMFFELEE 366
+D GK+T T+ ++ G + GE T D + EQ+R ITI S A + F++
Sbjct: 105 IDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHR 162
Query: 367 KDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
IN+ID+PGHVDF+ EV ALRV DGA
Sbjct: 163 --------------------INIIDTPGHVDFTLEVERALRVLDGA 188
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 415 KGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
K + +N+ID+PGHVDF+ EV ALRV DGA
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGA 160
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 415 KGFLINLIDSPGHVDFSSEVTAALRVTDGA 504
K + +N+ID+PGHVDF+ EV ALRV DGA
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGA 160
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 199 VDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLV 378
VDHGK+TLT +L I + A + D +E+ R ITI + + +E E +
Sbjct: 88 VDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINTATVE--YETENRHYA 145
Query: 379 FITNP 393
+ P
Sbjct: 146 HVDCP 150
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 113 KMVNFTGRRDPWDDGQEAEYPQHVCDRPRSITASQPSRTRWFPRPV 250
K V G+ W DG ++ Y Q RS+ A+Q W+P P+
Sbjct: 585 KYVGLKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPL 630
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 113 KMVNFTGRRDPWDDGQEAEYPQHVCDRPRSITASQPSRTRWFPRPV 250
K V G+ W DG ++ Y Q RS+ A+Q W+P P+
Sbjct: 585 KYVGLKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPL 630
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 113 KMVNFTGRRDPWDDGQEAEYPQHVCDRPRSITASQPSRTRWFPRPV 250
K V G+ W DG ++ Y Q RS+ A+Q W+P P+
Sbjct: 585 KYVGLKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPL 630
>At2g27035.1 68415.m03248 plastocyanin-like domain-containing
protein low similarity to SP:P80728 Mavicyanin
{Cucurbita pepo}; contains Pfam profile PF02298:
Plastocyanin-like domain
Length = 163
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 777 PDPKPTEPLLGSTRTSPMGPPSSLYVAIMTLTFSTI 670
P P P+ P ++ T+P+ PP+++ AI+ F +
Sbjct: 126 PQPPPSAPTNFTSTTTPLIPPNAITAAILIFAFKAL 161
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 209 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 370
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At1g75800.1 68414.m08805 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam
profile: PF00314 Thaumatin family
Length = 330
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 777 PDPKPTEPLLGSTRTSPMGPPSSLYVAIMT 688
PDPKPT P G++ T+P G S+ + + T
Sbjct: 262 PDPKPTTP-TGTSSTTPAGDSSTTWSPVDT 290
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 200 SITASQPSRTRWFPRPVSLLVRE 268
S T+++P R RW P+P +L+ E
Sbjct: 11 SSTSTEPVRARWSPKPEQILILE 33
>At1g66310.1 68414.m07530 F-box family protein contains F-box domain
Pfam:PF00646
Length = 442
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 684 LTSL*PHITMMVVPWVRCVSTLARALLVSGLVFMGGLS 797
LTSL P + ++V+ WV+ + LA +L+SG + + L+
Sbjct: 161 LTSL-PCVKVIVLEWVKFANDLALEMLISGCLVLESLT 197
>At4g22740.2 68417.m03281 glycine-rich protein
Length = 356
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 98 NHKPSKMVNFTGRRDPWDD 154
N PS M NF G RDP+DD
Sbjct: 41 NGPPSLMSNFFGGRDPFDD 59
>At4g22740.1 68417.m03280 glycine-rich protein
Length = 356
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 98 NHKPSKMVNFTGRRDPWDD 154
N PS M NF G RDP+DD
Sbjct: 41 NGPPSLMSNFFGGRDPFDD 59
>At3g51080.1 68416.m05593 zinc finger (GATA type) family protein
GATA transcription factor 3 - Arabidopsis thaliana,
PIR:T05288
Length = 312
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 814 ENCLRGESPPMKTRPETNRALARVDTHLTHGTT 716
E C + + P +KTRP+ R RV +H + T
Sbjct: 132 ETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLT 164
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 206 TASQPSRTRWFPRPVSLLVRE 268
T+++P R+RW P+P +L+ E
Sbjct: 25 TSAEPVRSRWSPKPEQILILE 45
>At4g10070.1 68417.m01647 KH domain-containing protein DNA-directed
RNA polymerase (EC 2.7.7.6) II largestchain - mouse,
PIR2:A28490
Length = 725
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 746 GRHAPHPWDHHHR 708
G HAPHP+D+H R
Sbjct: 375 GPHAPHPYDYHPR 387
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,195,671
Number of Sequences: 28952
Number of extensions: 381154
Number of successful extensions: 1235
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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