Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C01
         (902 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0N2S3 Cluster: Eukaryotic initiation factor 4B protein...    93   1e-17
UniRef50_Q01VR0 Cluster: Putative uncharacterized protein precur...    36   1.1  
UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic...    35   2.5  
UniRef50_UPI0000DB6F26 Cluster: PREDICTED: similar to Eukaryotic...    35   2.5  

>UniRef50_Q0N2S3 Cluster: Eukaryotic initiation factor 4B protein;
           n=1; Bombyx mori|Rep: Eukaryotic initiation factor 4B
           protein - Bombyx mori (Silk moth)
          Length = 394

 Score = 92.7 bits (220), Expect = 1e-17
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = +3

Query: 105 DITSIIAEPTTIATTNNWGNAAEDETENFGYASHTRAPVVVPSA 236
           DITSIIAEPTTIATTNNW NAAEDETENFGYASHTRAPVV+PSA
Sbjct: 17  DITSIIAEPTTIATTNNWANAAEDETENFGYASHTRAPVVLPSA 60



 Score = 57.2 bits (132), Expect = 5e-07
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +1

Query: 238 SRAARGGLAVDDESXPXXPPXIAHXSNXPYDV 333
           SRAARGGLAVDDES P  PP IAH SN PYDV
Sbjct: 61  SRAARGGLAVDDESIPHRPPFIAHISNLPYDV 92


>UniRef50_Q01VR0 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 338

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = -2

Query: 292 GXXVXTHHQXPSLLVLHEKAEGTTTGARVCDAYPKF-SVSSSAAFPQLLVVAIVVGSAIM 116
           G  +      P +L L EK        R  D +P+F +++S+    + L  A +   A+ 
Sbjct: 181 GRAIALRSLLPEILALQEKTNAAFQPPRSIDQHPRFIALNSTLKLARELDAAKLYAGAMY 240

Query: 115 LVMSALIHFAFFDFLPVAAXIKRL 44
             + A+ HF   D  PVA  I  L
Sbjct: 241 QYLEAVRHFGMLDAAPVAPSIVAL 264


>UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic
           initiation factor 4B protein; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to eukaryotic
           initiation factor 4B protein - Nasonia vitripennis
          Length = 555

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +1

Query: 241 RAARGGLAVDDESXPXXPPXIAHXSNXPYDV 333
           R+AR  ++V++E+ P  PP +A+ SN PYDV
Sbjct: 64  RSARD-MSVNEENIPSSPPFVAYISNLPYDV 93



 Score = 33.9 bits (74), Expect = 5.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +3

Query: 135 TIATTNNWGNAAEDETENFGYASHTRAPVVVPSA 236
           T+    +W ++ ED+ +  GY+S  R P+++P+A
Sbjct: 29  TLPKIKSWADSTEDDDDYGGYSSRPREPIILPTA 62


>UniRef50_UPI0000DB6F26 Cluster: PREDICTED: similar to Eukaryotic
           translation initiation factor 4B (eIF-4B); n=1; Apis
           mellifera|Rep: PREDICTED: similar to Eukaryotic
           translation initiation factor 4B (eIF-4B) - Apis
           mellifera
          Length = 502

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 241 RAARGGLAVDDESXPXXPPXIAHXSNXPYDV 333
           RAARG   V DE  P  PP +A+ SN PY+V
Sbjct: 65  RAARGP-RVADEDIPTNPPYVAYLSNLPYEV 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,627,757
Number of Sequences: 1657284
Number of extensions: 5697211
Number of successful extensions: 16163
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16120
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)