Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C01
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical...    29   3.4  
Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = -2

Query: 232 EGTTTGARVCDAYPKFSVSSSAAFPQLLVVAIVVGSAIMLVMSALIHFAFFDFLPVAAXI 53
           E TT   R   A+  FS   S      L+V + V S I+ V S +       FLPV   I
Sbjct: 125 EVTTRMRRTLVAFNLFSFIIST-----LLVNLQVSSGIVKVFSCIYAIPTVIFLPVYVVI 179

Query: 52  KRLANLKNSL 23
             +AN+K SL
Sbjct: 180 HFVANIKGSL 189


>AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = -2

Query: 232 EGTTTGARVCDAYPKFSVSSSAAFPQLLVVAIVVGSAIMLVMSALIHFAFFDFLPVAAXI 53
           E TT   R   A+  FS   S      L+V + V S I+ V S +       FLPV   I
Sbjct: 125 EVTTRMRRTLVAFNLFSFIIST-----LLVNLQVSSGIVKVFSCIYAIPTVIFLPVYVVI 179

Query: 52  KRLANLKNSL 23
             +AN+K SL
Sbjct: 180 HFVANIKGSL 189


>Z81536-9|CAB04362.1|  733|Caenorhabditis elegans Hypothetical
           protein F40D4.12 protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 92  MDQSRHHKHYSRTDHNRNYQQLGE 163
           +D+S+H+KH  +T HN  Y  L E
Sbjct: 350 LDESKHNKHSYQTAHNEWYNMLCE 373


>AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical
           protein W05E7.2 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = -2

Query: 157 QLLVVAIVVGSAIMLVMSALIHFAFFDFLPVAAXIKRLANL 35
           + +V+AI +GS      SALI F+   ++P+   ++RLA+L
Sbjct: 193 EAIVLAITLGST-----SALIFFSALLYIPITISVRRLAHL 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,900,062
Number of Sequences: 27780
Number of extensions: 147717
Number of successful extensions: 443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)