Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B24
         (869 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033286-1|AAH33286.1|  305|Homo sapiens SCML4 protein protein.        31   5.4  
AL512592-2|CAI13630.1|  305|Homo sapiens protein ( Human DNA seq...    31   5.4  
AL096816-2|CAI42849.1|  305|Homo sapiens protein ( 00197, novel ...    31   5.4  
AK093571-1|BAC04198.1|  356|Homo sapiens protein ( Homo sapiens ...    31   5.4  
AK074125-1|BAB84951.1|  178|Homo sapiens FLJ00197 protein protein.     31   5.4  

>BC033286-1|AAH33286.1|  305|Homo sapiens SCML4 protein protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 SRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS 332
           S   +E EEGR  ++   TT +Y V PV   R+S+ T+ S
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSAS 224


>AL512592-2|CAI13630.1|  305|Homo sapiens protein ( Human DNA
           sequence from clone RP11-35D6 on chromosome 6 Contains
           part of a novel gene (FLJ00197).  ).
          Length = 305

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 SRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS 332
           S   +E EEGR  ++   TT +Y V PV   R+S+ T+ S
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSAS 224


>AL096816-2|CAI42849.1|  305|Homo sapiens protein ( 00197, novel SAM
           domain  ).).
          Length = 305

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 SRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS 332
           S   +E EEGR  ++   TT +Y V PV   R+S+ T+ S
Sbjct: 185 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSAS 224


>AK093571-1|BAC04198.1|  356|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36252 fis, clone THYMU2002109, moderately
           similar to Homo sapiens Sex comb on midleg homolog 1
           isoform 1. ).
          Length = 356

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 SRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS 332
           S   +E EEGR  ++   TT +Y V PV   R+S+ T+ S
Sbjct: 156 SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSAS 195


>AK074125-1|BAB84951.1|  178|Homo sapiens FLJ00197 protein protein.
          Length = 178

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 SRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS 332
           S   +E EEGR  ++   TT +Y V PV   R+S+ T+ S
Sbjct: 58  SEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSAS 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,948,661
Number of Sequences: 237096
Number of extensions: 2365777
Number of successful extensions: 4566
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4561
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)