Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B24
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X62636-1|CAA44502.1|  326|Drosophila melanogaster hrp36.1 protein.     31   1.6  
AY061194-1|AAL28742.1|  292|Drosophila melanogaster LD15403p pro...    31   2.1  
AF147700-1|AAD33987.1|  292|Drosophila melanogaster nebula protein.    31   2.1  
AE014297-2163|AAF55285.1|  292|Drosophila melanogaster CG6072-PA...    31   2.1  
AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p pro...    29   8.3  
AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-...    29   8.3  
AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA...    29   8.3  

>X62636-1|CAA44502.1|  326|Drosophila melanogaster hrp36.1 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 2/116 (1%)
 Frame = +2

Query: 233 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 406
           GG +  G  GQ D G  G  G+  +   +  G   G   G      GG+      GG   
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264

Query: 407 WANKNAQAXIDINRQIGXRSGMTASGSGVWDLDKNTHISXGGMVSKGFGXKKPNVG 574
           W  +        N Q G   G    G G      N++ S GG    G G +  N+G
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGGNGGGGGGGQGGNMG 320


>AY061194-1|AAL28742.1|  292|Drosophila melanogaster LD15403p
           protein.
          Length = 292

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 474 QPPAPVCGILIRTPTSXPAVWSXKD 548
           QPPAPV   LI  P S PA W  ++
Sbjct: 204 QPPAPVKQFLISPPASPPAGWEPRE 228


>AF147700-1|AAD33987.1|  292|Drosophila melanogaster nebula protein.
          Length = 292

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 474 QPPAPVCGILIRTPTSXPAVWSXKD 548
           QPPAPV   LI  P S PA W  ++
Sbjct: 204 QPPAPVKQFLISPPASPPAGWEPRE 228


>AE014297-2163|AAF55285.1|  292|Drosophila melanogaster CG6072-PA
           protein.
          Length = 292

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 474 QPPAPVCGILIRTPTSXPAVWSXKD 548
           QPPAPV   LI  P S PA W  ++
Sbjct: 204 QPPAPVKQFLISPPASPPAGWEPRE 228


>AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 266 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 388
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-33
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 266 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 388
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 266 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 388
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,543,900
Number of Sequences: 53049
Number of extensions: 740640
Number of successful extensions: 1878
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1878
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)