Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B23
         (943 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19338 Cluster: Nucleolin; n=39; Deuterostomia|Rep: Nuc...    36   1.1  
UniRef50_Q10M51 Cluster: Retrotransposon protein, putative, Ty1-...    36   1.5  
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas...    36   2.0  
UniRef50_Q7QFC2 Cluster: ENSANGP00000007476; n=1; Anopheles gamb...    35   2.6  
UniRef50_Q9LJ64 Cluster: Extensin protein-like; n=8; Eukaryota|R...    34   4.6  
UniRef50_Q38M49 Cluster: Putative glycine-rich RNA binding prote...    34   4.6  
UniRef50_Q0DMW0 Cluster: Os03g0790000 protein; n=1; Oryza sativa...    34   6.0  
UniRef50_Q2HCX6 Cluster: Putative uncharacterized protein; n=3; ...    34   6.0  
UniRef50_Q1IJ73 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  
UniRef50_Q2GSQ8 Cluster: Putative uncharacterized protein; n=2; ...    33   8.0  
UniRef50_Q9UMN6 Cluster: WW domain-binding protein 7; n=16; Euka...    33   8.0  

>UniRef50_P19338 Cluster: Nucleolin; n=39; Deuterostomia|Rep:
           Nucleolin - Homo sapiens (Human)
          Length = 710

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 19/41 (46%), Positives = 19/41 (46%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGG  G G  G  R  R   G  G GG    GG RG  GGG
Sbjct: 657 GGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGG 697


>UniRef50_Q10M51 Cluster: Retrotransposon protein, putative,
           Ty1-copia subclass; n=6; Oryza sativa (japonica
           cultivar-group)|Rep: Retrotransposon protein, putative,
           Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
          Length = 1061

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGG  G G  G   ++R    R G GGE    G RG  GGG
Sbjct: 17  GGGGGGGGGGGGGGKRRRRRRRSGGGGEGGREGLRGGCGGG 57


>UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA
            helicase-like; n=9; Eukaryota|Rep: Myc-regulated DEAD/H
            box 18 RNA helicase-like - Ostreococcus tauri
          Length = 2729

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = -3

Query: 941  GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
            GGG  G G  G     R   GR G GG    GG+RG  GGG
Sbjct: 2685 GGGSGGRGGGGRGGGGRGGGGRGG-GGRGGRGGDRGFGGGG 2724


>UniRef50_Q7QFC2 Cluster: ENSANGP00000007476; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000007476 - Anopheles gambiae
           str. PEST
          Length = 660

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGG 822
           GGG+ G G  G   ++    G  G GG    GG RG  GG
Sbjct: 587 GGGQGGGGGGGAGGQRSMGGGNVGGGGGGSGGGNRGSGGG 626


>UniRef50_Q9LJ64 Cluster: Extensin protein-like; n=8; Eukaryota|Rep:
           Extensin protein-like - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 956

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
           PPPP   S         P   S  PP   P PP+ S PP P+
Sbjct: 648 PPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPV 689


>UniRef50_Q38M49 Cluster: Putative glycine-rich RNA binding
           protein-like; n=1; Solanum tuberosum|Rep: Putative
           glycine-rich RNA binding protein-like - Solanum
           tuberosum (Potato)
          Length = 176

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGG  G G  G  R +RE  G    GG    GG R   GGG
Sbjct: 86  GGGGGGRGGGGYVRWRREGGGGGYGGGGGYGGGRREGGGGG 126


>UniRef50_Q0DMW0 Cluster: Os03g0790000 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os03g0790000 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 360

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -3

Query: 917 EXGXXREKREXXGRXGXGGEKXXGGERGXXGG 822
           + G  REKR   G  G GGE   GGER   GG
Sbjct: 301 QHGPGREKRRHGGGGGGGGEGEGGGERKGKGG 332


>UniRef50_Q2HCX6 Cluster: Putative uncharacterized protein; n=3;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 690

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERG 834
           GGG+ G G  G      E  GR G GGE+  GGE+G
Sbjct: 639 GGGDEGGGGDGG----EEGGGRGGGGGEEGGGGEKG 670


>UniRef50_Q1IJ73 Cluster: Putative uncharacterized protein; n=1;
           Acidobacteria bacterium Ellin345|Rep: Putative
           uncharacterized protein - Acidobacteria bacterium
           (strain Ellin345)
          Length = 477

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGG    G        R      G GG +  GG RG  GGG
Sbjct: 432 GGGSRSSGSSARASSSRGSSSMGGGGGSRGGGGSRGGGGGG 472


>UniRef50_Q2GSQ8 Cluster: Putative uncharacterized protein; n=2;
           Fungi/Metazoa group|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1005

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -3

Query: 941 GGGEX--GXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGGE   G G+           GR G GG+   GG RG  GGG
Sbjct: 24  GGGEFRGGGGQGNYAGGGYRGGGRGGGGGDNYQGGGRGGGGGG 66


>UniRef50_Q9UMN6 Cluster: WW domain-binding protein 7; n=16;
           Eukaryota|Rep: WW domain-binding protein 7 - Homo
           sapiens (Human)
          Length = 2715

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = +1

Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLP 333
           PPPP             P   S  PP   P PP  S PPLP
Sbjct: 402 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLP 442


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,207,358
Number of Sequences: 1657284
Number of extensions: 3295615
Number of successful extensions: 52461
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43141
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86549281324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)