Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B23
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   1.1  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.7  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 284 PXXXPPXPPWXPXPPF 331
           P   P  PPW P PPF
Sbjct: 87  PGIPPFRPPWHPRPPF 102


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
           GGG+ G G  G         GR G GG +  G  RG   GG
Sbjct: 58  GGGDDGYGGGG-------RGGRGGRGGGRGRGRGRGGRDGG 91



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 333 GKGGXGXQGGXGGXXXGXXGXXXG 262
           G+GG G +GG  G   G  G   G
Sbjct: 68  GRGGRGGRGGGRGRGRGRGGRDGG 91


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 262 PXXXSXXPPXXXPXPPLXSXPPLPL 336
           P   +  PP   P PP    PP PL
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPL 598


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 878 RXGXGGEKXXGGERGXXGGG 819
           R G GG    GGE G  GGG
Sbjct: 721 RGGDGGCGSIGGEVGSVGGG 740


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,768
Number of Sequences: 2352
Number of extensions: 2550
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)