Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B23
(943 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 33 0.57
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 33 0.57
X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein. 31 1.7
AY113557-1|AAM29562.1| 93|Drosophila melanogaster RH06401p pro... 31 2.3
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 30 5.3
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 30 5.3
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 30 5.3
BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 30 5.3
AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 30 5.3
AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 30 5.3
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P... 30 5.3
AY118625-1|AAM49994.1| 177|Drosophila melanogaster RE24635p pro... 29 7.0
AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-P... 29 7.0
AE014134-1929|AAF52989.1| 177|Drosophila melanogaster CG7299-PA... 29 7.0
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 29 9.2
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 29 9.2
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 29 9.2
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 33.1 bits (72), Expect = 0.57
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKR---EXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R + + GR G GG + GG G GGG
Sbjct: 34 GGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGG 77
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R G G GG + GG G GG
Sbjct: 62 GGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGG 102
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 33.1 bits (72), Expect = 0.57
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKR---EXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R + + GR G GG + GG G GGG
Sbjct: 27 GGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGG 70
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R G G GG + GG G GG
Sbjct: 55 GGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGG 95
>X71975-1|CAA50795.1| 239|Drosophila melanogaster GCR 101 protein.
Length = 239
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R G G GG + GG G GGG
Sbjct: 11 GGGGRGFGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGG 51
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R GR G GG G RG GGG
Sbjct: 191 GGGRGGGGGRGGGGF-RGGAGRNGGGGGGGGGFNRGRGGGG 230
Score = 29.5 bits (63), Expect = 7.0
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXG--GERGXXGGG 819
GGG G G G R GR G GG G G G GGG
Sbjct: 173 GGGGGGFGGRGGRGGGRGGGGRGGGGGRGGGGFRGGAGRNGGG 215
>AY113557-1|AAM29562.1| 93|Drosophila melanogaster RH06401p
protein.
Length = 93
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G +K G G G GG +G GGG
Sbjct: 41 GGGGGGQSGYGGGGQKNGGGGHGGGGQGSYGGGSQGGHGGG 81
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 213 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 253
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 175 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 215
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 213 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 253
>BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p
protein.
Length = 399
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 214 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 254
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R R G G GG GG G GGG
Sbjct: 232 GGGGGGGGGGGGGRFDR---GGGGGGGRYDRGGGGGGGGGG 269
>AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB,
isoform B protein.
Length = 399
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 214 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 254
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R R G G GG GG G GGG
Sbjct: 232 GGGGGGGGGGGGGRFDR---GGGGGGGRYDRGGGGGGGGGG 269
>AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA,
isoform A protein.
Length = 399
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G +R G G GG +RG GGG
Sbjct: 214 GGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGG 254
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G G R R G G GG GG G GGG
Sbjct: 232 GGGGGGGGGGGGGRFDR---GGGGGGGRYDRGGGGGGGGGG 269
>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
protein.
Length = 1701
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 263 PXXXPXXPXXXPPXPPWXPXPPFP 334
P P P PP PP P PP P
Sbjct: 1644 PLPLPPLPTALPPLPPLPPLPPLP 1667
>AY118625-1|AAM49994.1| 177|Drosophila melanogaster RE24635p
protein.
Length = 177
Score = 29.5 bits (63), Expect = 7.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
G G+ G G G + G+ G GG+ GG+ G G G
Sbjct: 73 GPGQGGFGGPGGFEGQGGFGGQGGFGGQGGFGGQGGFGGPG 113
>AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-PA
protein.
Length = 98
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G+ G G GG K GG G GGG
Sbjct: 51 GGGGGGGGKHGGGGGGGGKHGGGNGGGGKHGGGGGGGGGGG 91
>AE014134-1929|AAF52989.1| 177|Drosophila melanogaster CG7299-PA
protein.
Length = 177
Score = 29.5 bits (63), Expect = 7.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
G G+ G G G + G+ G GG+ GG+ G G G
Sbjct: 73 GPGQGGFGGPGGFEGQGGFGGQGGFGGQGGFGGQGGFGGPG 113
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 275 PXXPXXXPPXPPWXPXPPFP 334
P P PP PP P PP+P
Sbjct: 238 PPPPPPPPPPPPSYPYPPYP 257
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 29.1 bits (62), Expect = 9.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREK---REXXGRXGXGGEKXXGGERGXXGG 822
GGG G G G R + + GR G GG + G RG GG
Sbjct: 27 GGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGAFGGRGGGGG 69
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 29.1 bits (62), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 275 PXXPXXXPPXPPWXPXPPFP 334
P P PP PP P PP+P
Sbjct: 240 PPPPPPPPPPPPSYPYPPYP 259
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,944,348
Number of Sequences: 53049
Number of extensions: 228963
Number of successful extensions: 3565
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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