Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B23
(943 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 34 0.12
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 34 0.12
At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)... 33 0.36
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 33 0.36
At1g15830.1 68414.m01900 expressed protein 33 0.36
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 32 0.48
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 31 0.84
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 31 0.84
At5g62210.1 68418.m07811 embryo-specific protein-related contain... 30 1.9
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 30 1.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 2.6
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 30 2.6
At3g42130.1 68416.m04326 glycine-rich protein 29 4.5
At2g28490.1 68415.m03462 cupin family protein similar to preproM... 29 4.5
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 29 4.5
At5g59270.1 68418.m07427 lectin protein kinase family protein co... 29 5.9
At5g46730.1 68418.m05757 glycine-rich protein 29 5.9
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 7.8
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 7.8
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP S P S PP P PP+ S PP P+
Sbjct: 648 PPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPV 689
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPPP S P S PP P PP+ S PP
Sbjct: 684 PPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 722
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPPP S P S PP P PP+ S PP
Sbjct: 766 PPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 804
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 214 PPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPP S P S PP P PP+ S PP P+
Sbjct: 699 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPPV 739
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP + P S PP P PP+ S PP P+
Sbjct: 670 PPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHS-PPPPV 710
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP F P PP P PP+ S PP P+
Sbjct: 735 PPPPVFSPPP-----PAPIYSPPPPPVHSPPPPVHSPPPPPV 771
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP F S P S PP P PP PP P+
Sbjct: 656 PPPPVF-SPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPV 696
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 214 PPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPP S P S PP P PP+ S PP
Sbjct: 692 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 729
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP + P P P PP P P PP P
Sbjct: 774 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSP 807
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP S P S PP P PP+ S PP P+
Sbjct: 617 PPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPPV 658
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPPP S P S PP P PP+ S PP
Sbjct: 537 PPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 575
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 214 PPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPP S P S PP P PP+ S PP P+
Sbjct: 552 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPV 592
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP + P P P PP P + P PP P
Sbjct: 588 PPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPP 621
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP F P P P PP+ S PP P+
Sbjct: 625 PPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPPV 666
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 214 PPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPP S P S PP P PP+ S PP
Sbjct: 545 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 582
>At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 159
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXG--RXGXGGEKXXGGERGXXGGG 819
GGG G G G +RE G G GG GG G GGG
Sbjct: 92 GGGHRGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGGG 134
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP + S V P + PP P PP+ S PP P+
Sbjct: 559 PPPPVYSSPPPPHVYSPPPPVASPPPPSPP-PPVHSPPPPPV 599
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 211 PPPPXFXSTXFXXV-XXGPXXXSXXPPXXXPXPPLXSXPP 327
PPPP F V P S PP P PP S PP
Sbjct: 602 PPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPPP 641
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG+ G G RE+ GR GG + GE GGG
Sbjct: 274 GGGDKTNGRGGEGREEDNGGGRGAEGGGRGSTGEGVTDGGG 314
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPP 327
PPPP S P S PP P PP+ S PP
Sbjct: 560 PPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPP 598
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP ++ P P P PP P P PP P
Sbjct: 568 PPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAP 601
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G+ G G G G GG RG GGG
Sbjct: 25 GGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRGNRGGG 65
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G+ G G G G GG RG GGG
Sbjct: 25 GGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRGNRGGG 65
>At5g62210.1 68418.m07811 embryo-specific protein-related contains
weak similarity to embryo-specific protein 3
(GI:3335171) [Arabidopsis thaliana]
Length = 223
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP + P P P PP PP P PP P
Sbjct: 159 PPSPDFPPFSPSIPPPSPPYFPPEPPSIPPPPPP 192
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP S + P S PP P PP+ S PP P+
Sbjct: 67 PPPPPIYSPPPPPIYP-PPIYSPPPPPIYP-PPIYSPPPTPI 106
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLPL 336
PPPP S P S PP P PP+ S PP P+
Sbjct: 54 PPPPPVYSRP-VAFPPPPPIYSPPPPPIYP-PPIYSPPPPPI 93
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFPXLXS 346
PP ++ P P P P PP P PP P + S
Sbjct: 444 PPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYS 481
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPPLXSXPPLP 333
PPPP + S P PP P PP+ S PP P
Sbjct: 431 PPPPVY-SPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 470
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 211 PPPPXFXSTXFXXVXXGPXXXSXXPPXXXPXPP-LXSXPPLPL 336
PPPP + P S PP P PP + S PP P+
Sbjct: 475 PPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPV 517
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP ++ P P P P PP P PP P
Sbjct: 475 PPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFPXL 340
PP ++ P P PP P + P PP P +
Sbjct: 581 PPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCI 616
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 260 DPXXXPXXPXXXPPXPPWXPXPPFP 334
DP P P PP PP P PP P
Sbjct: 34 DPPLFPQSPPPPPPPPPPPPPPPPP 58
>At3g42130.1 68416.m04326 glycine-rich protein
Length = 65
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G R R G GG++ GG G GGG
Sbjct: 27 GGGNVYGGGGGYERHSRGYRSGGGCGGKRYGGG--GREGGG 65
>At2g28490.1 68415.m03462 cupin family protein similar to
preproMP27-MP32 [Cucurbita cv. Kurokawa Amakuri]
GI:691752, allergen Gly m Bd 28K [Glycine max]
GI:12697782, vicilin [Matteuccia struthiopteris]
GI:1019792; contains Pfam profile PF00190: Cupin
Length = 511
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERG 834
GGG G G G + E G G GGE GG RG
Sbjct: 52 GGGGGGGGAWGG---EGEGGGEWGGGGEGGGGGRRG 84
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 260 DPXXXPXXPXXXPPXPPWXPXPPFP 334
DP P P PP P P PP P
Sbjct: 11 DPWNSPYSPHLHPPSAPLPPPPPLP 35
>At5g59270.1 68418.m07427 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 668
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 260 DPXXXPXXPXXXPPXPPWXPXPP 328
DP P P PP PP P PP
Sbjct: 261 DPPNRPPPPSSPPPPPPPPPTPP 283
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGG G G E G G G GG G GGG
Sbjct: 176 GGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGG 216
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 941 GGGEXGXGEXGXXREKREXXGRXGXGGEKXXGGERGXXGGG 819
GGGE G G G G G GG GGE G GG
Sbjct: 236 GGGEGG-GYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGG 275
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 233 PPXXLWXXXDPXXXPXXPXXXPPXPPWXPXPPFP 334
PP P P P PP PP+ PP P
Sbjct: 68 PPPPYIPCPPPPYTPKPPTVKPPPPPYVKPPPPP 101
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 263 PXXXPXXPXXXPPXPPWXPXPPFP 334
P P P PP PP P PP P
Sbjct: 62 PPPPPPPPCPPPPSPPPCPPPPSP 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,240,727
Number of Sequences: 28952
Number of extensions: 107708
Number of successful extensions: 2506
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2256303936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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