Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B22
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0346 - 3828511-3828635,3829124-3829154,3829368-3830555           29   4.7  
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    29   4.7  
11_01_0572 + 4565353-4565535,4566856-4567095,4567922-4568086,456...    29   6.3  
04_04_0524 - 25916869-25916876,25917352-25917506,25917712-259178...    28   8.3  
04_03_0232 - 13049649-13052807                                         28   8.3  

>10_01_0346 - 3828511-3828635,3829124-3829154,3829368-3830555
          Length = 447

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 844 PGRPGDFNHGVQRPXGLPRGSRSYRAPKAXLN 749
           PG   + N+G+ +P G P    SYR PK   N
Sbjct: 325 PGPTSERNYGLFKPDGTPVYELSYRLPKDNTN 356


>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -1

Query: 301 LSMIRLLTTFWMMEPLPWL-----SYSKL*RTALS*SPVRMLLYSFSSRSWLEVSADSST 137
           L+++ L+   W + P   L     + S      L  SP   +  SF S +    S D++T
Sbjct: 36  LALLTLIMALWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTAT 95

Query: 136 TPALAASMHIANTTR 92
            P   A+  +A TTR
Sbjct: 96  VPTTTAAARVAATTR 110


>11_01_0572 +
           4565353-4565535,4566856-4567095,4567922-4568086,
           4568612-4568887
          Length = 287

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 614 VLIFKYWLYLVLWILKYTLLFSHQGNELPTDEFSMLVYTI 495
           V +F  W+YL+ W+ ++TL ++     L T  F+++V  I
Sbjct: 62  VFLFLLWVYLLNWVRRFTLTYTDGSIWLTT--FAVMVSAI 99


>04_04_0524 -
           25916869-25916876,25917352-25917506,25917712-25917841,
           25918013-25918094,25918180-25918213,25918271-25918327,
           25918686-25918791,25920755-25920881
          Length = 232

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 593 LYLVLWILKYTLLFSHQGNELPTDEFSMLV 504
           L L+ +IL+Y L F  + N LP D F+ LV
Sbjct: 47  LCLLWYILRYVLGFFQRYNLLPRDSFTFLV 76


>04_03_0232 - 13049649-13052807
          Length = 1052

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -1

Query: 187 YSFSSRSWLEVSADSSTTPALAASMHIANTTRSFILLGAFQIAFKSANQILR 32
           +  SS+ W   +   STT    A++ +     SF +  A  +  KS++ ILR
Sbjct: 288 FGLSSKEWRHTNRWISTTHQYVATVKVPPQATSFFVTEAGSLIDKSSSMILR 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,354,873
Number of Sequences: 37544
Number of extensions: 427822
Number of successful extensions: 1242
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)