Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B21
         (830 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55903 Cluster: PREDICTED: hypothetical protein;...    44   0.006
UniRef50_A0V605 Cluster: Diguanylate cyclase; n=1; Delftia acido...    34   5.0  
UniRef50_Q019M1 Cluster: YebC-related; n=3; Ostreococcus|Rep: Ye...    33   6.6  

>UniRef50_UPI0000D55903 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 534

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 489 VSDRKKEVLLDAGALGDVPAVYXVPQPALHXMPVIGVYIEPR 614
           V  +    +LDA  +GD PAVY V  P  H MP +GV+++ R
Sbjct: 88  VEQQPTYTVLDASTVGDFPAVYTVCSPERHQMPAVGVFVDKR 129


>UniRef50_A0V605 Cluster: Diguanylate cyclase; n=1; Delftia
           acidovorans SPH-1|Rep: Diguanylate cyclase - Delftia
           acidovorans SPH-1
          Length = 532

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 455 QGPPVQGRPLLRRFH-SHSLLTQAL*EQLXIPALEESFQRTLVPH 324
           Q PPV  + L RR H  H  L+ A+ +QL +  L +   +TLV H
Sbjct: 154 QSPPVDAKALARRLHDQHYQLSFAIADQLQVLQLMQELLQTLVQH 198


>UniRef50_Q019M1 Cluster: YebC-related; n=3; Ostreococcus|Rep:
           YebC-related - Ostreococcus tauri
          Length = 374

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +3

Query: 411 MKATEKRPSLNWRSLSPIEASKNFWIVSDRKKEVLLDAGALGDVPAVYXVPQPALHXMP- 587
           +K  ++   L    ++ IE S     ++++  + LL   AL DV AVY      LH    
Sbjct: 227 LKVNDEETGLKCIPVAEIEVSDEDAAINEKIVDALL---ALDDVDAVYTQEARRLHSYSF 283

Query: 588 VIGVYIEPRCSEPASDTKLDQCRL 659
           ++ +   PR +EP+S  ++D  RL
Sbjct: 284 IVSLRKHPRFTEPSSVVRVDAHRL 307


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,487,415
Number of Sequences: 1657284
Number of extensions: 16659313
Number of successful extensions: 42599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42584
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)