Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B21
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    28   7.1  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    28   7.1  

>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 345 KTFLQRRNSKLLLKRLCQ*RVTMKATEKR 431
           K FLQ ++ KL+LKRLC+        +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
 Frame = +3

Query: 324 MWNQRSLKT-FLQRRNSKL-LLKRLCQ*RVTMKATEKRPSLNWRSLSPIEASKN---FWI 488
           M +Q+S+K   L++R+  L ++   CQ   ++K  ++R S   R L      +N    WI
Sbjct: 156 MESQKSMKNPSLKKRDDNLEVMPESCQVANSVKIIKRR-SRKHRPLDRNIFKENGEPVWI 214

Query: 489 VSDRKKEVLLDAGALGDVP 545
           V DRK+ V+ + G +   P
Sbjct: 215 VPDRKEPVMTEDGVMTRYP 233


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 345 KTFLQRRNSKLLLKRLCQ*RVTMKATEKR 431
           K FLQ ++ KL+LKRLC+        +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,922,717
Number of Sequences: 27780
Number of extensions: 381253
Number of successful extensions: 1026
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)