Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B19
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0231 + 23488588-23488689,23488775-23488875,23489012-234891... 42 6e-04
01_06_0134 + 26805329-26805430,26807130-26807230,26807876-268080... 41 0.001
01_01_0858 - 6699126-6699128,6699219-6699318,6700052-6700278,670... 35 0.063
06_01_0486 - 3455030-3455770 31 1.4
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.8
02_05_0686 - 30900748-30902167,30903442-30904742 30 1.8
11_06_0016 - 19284810-19284926,19285527-19286879 29 3.2
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 3.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.5
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 29 5.5
03_01_0515 - 3864796-3865425 28 7.3
12_02_0299 - 17051570-17052474,17053542-17053755 28 9.6
07_03_1751 - 29215074-29216270 28 9.6
03_05_0589 + 25919965-25920331,25920461-25920780 28 9.6
>05_05_0231 +
23488588-23488689,23488775-23488875,23489012-23489168,
23489365-23489594,23489696-23489795,23489878-23489916
Length = 242
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
++DADV KQI+ M+ FI Q FNIEK +LV+ ++
Sbjct: 1 MNDADVGKQIQQMVRFILQEAEEKASEISVAAEEEFNIEKLQLVESEKRRIRQDYERKAK 60
Query: 307 XXXXXXXXQSSNMLNQARLKVLKVPE 384
+ S LN AR+KVL+ +
Sbjct: 61 QVDVGRKIEYSTQLNAARIKVLRAQD 86
>01_06_0134 +
26805329-26805430,26807130-26807230,26807876-26808032,
26808386-26808582,26809188-26809287,26809501-26809536
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
++DADV KQI+ M+ FI Q FNIEK +LV+ ++
Sbjct: 1 MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 307 XXXXXXXXQSSNMLNQARLKVLKVPE 384
+ S LN +R+KVL+ +
Sbjct: 61 QVEVRKKIEYSMQLNASRIKVLQAQD 86
>01_01_0858 -
6699126-6699128,6699219-6699318,6700052-6700278,
6701032-6701188,6701422-6701522,6702147-6702251
Length = 230
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
++D DV +Q+K M FI Q F IEK +LV+ ++
Sbjct: 2 MNDGDVARQLKQMTDFIRQEAVEKAAEIEAAAAEEFQIEKLQLVEAEKKRIRLEFERNEK 61
Query: 307 XXXXXXXXQSSNMLNQARLKVLKVPE 384
+ S LN +RL+VL+ +
Sbjct: 62 QGDIKKKIEYSKQLNASRLEVLQAQD 87
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP TP P PP PP PP P PPP
Sbjct: 86 PPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPP 127
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P GG P PP A F PP P PPP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGF-RGGTPPPNAHGGVAPPPPPP 1189
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPP-GAXFXXXXXXPPXXXPPXXPXXPPP 780
P P P P K P PP G PP PP P PPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>11_06_0016 - 19284810-19284926,19285527-19286879
Length = 489
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G + PP + P PP P PPP
Sbjct: 52 PPLHPVGDRAIHPPMPPASAAAGDGAAPDQEPPPSPPPPPPP 93
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 688 PGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PG PP PP PP P PPP
Sbjct: 136 PGQEPPPPHVPKAAPPPPPPPPPHAPPGPPP 166
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXP--PXXXPPXXPXXPPP 780
P P PP P G P PP P P PP P PPP
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPP 1182
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P PP P P PP PP PP P PPP
Sbjct: 1162 PSPPPATPPPPPPLSPSLPPPPPPP----PLPSGPPPQPAPPPLPIQPPP 1207
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 691 GXXPPGAXFXXXXXXPPXXXPPXXPXXPP 777
G PPG + PP PP P PP
Sbjct: 333 GYYPPGPGYAYPPPYPPSYPPPYQPSYPP 361
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 636 PXKIFLSPPXPXGGXXXXXFXPPGGXFXKXXXXPPXXXPPXXTXXPPP 779
P + SPP P G PP P PP PPP
Sbjct: 54 PPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP 101
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP F PP PP P PPP
Sbjct: 257 PPAFPFPLPPWPWAPPPAFPFPHL---PPIFSPPSPPPPPPP 295
>07_03_1751 - 29215074-29216270
Length = 398
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 779 GGGXXGXXGGXXXGGXXXXFXKXAPGGXKPGXXXPPXGVWGGQK 648
GGG G GG GG A GG G G +GG K
Sbjct: 318 GGGKGGGFGGGFGGGKGGGVGGGAGGGFGGGGGAGAGGGFGGGK 361
>03_05_0589 + 25919965-25920331,25920461-25920780
Length = 228
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 171 GHHVLDLFLNICIAERHGCCLFLTPLTRKTADIEPRKLMTPT 46
GH V+ L L + +A C T +T A ++P L P+
Sbjct: 5 GHGVVGLALAVVVAAAATLCAAQTTMTTAAASVQPTALTMPS 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,828
Number of Sequences: 37544
Number of extensions: 317657
Number of successful extensions: 1192
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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