Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B19
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.1  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    24   6.1  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   8.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/48 (29%), Positives = 15/48 (31%)
 Frame = +1

Query: 637 PXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
           P +F  PP         P   P    F       P   PP  P  PPP
Sbjct: 544 PPQFLPPPLNLLRAPFFP-LNPAQLRFPAGFPNLPNAQPPPAPPPPPP 590



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 736 PPXXXPPXXPXXPPP 780
           PP   PP  P  PPP
Sbjct: 581 PPPAPPPPPPMGPPP 595


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 643 KFFCPPXTPXGGKXXPGXXPPGA 711
           K  C P    G +  PG  PP A
Sbjct: 74  KLVCSPDYAYGSRGHPGVIPPNA 96


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 361 DELGSACSKIGSS 323
           D LGSACS++ SS
Sbjct: 72  DSLGSACSQLSSS 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,847
Number of Sequences: 2352
Number of extensions: 8716
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)