BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B19
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subu... 74 5e-13
X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase pr... 74 5e-13
CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein. 74 5e-13
BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting... 74 5e-13
BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting... 74 5e-13
BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting... 65 2e-10
BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting... 65 2e-10
AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens ... 65 2e-10
AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein. 65 2e-10
AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit pro... 65 2e-10
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 34 0.66
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 34 0.66
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 33 0.88
M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein. 32 2.0
AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein. 32 2.0
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 4.7
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 4.7
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 4.7
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 4.7
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 4.7
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 4.7
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 4.7
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 4.7
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 4.7
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 31 4.7
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 6.2
>X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subunit
protein.
Length = 226
Score = 74.1 bits (174), Expect = 5e-13
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
Q SN++NQARLKVL+
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLR 85
>X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase
protein.
Length = 226
Score = 74.1 bits (174), Expect = 5e-13
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDRKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
Q SN++NQARLKVL+
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLR 85
>CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein.
Length = 226
Score = 74.1 bits (174), Expect = 5e-13
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
Q SN++NQARLKVL+
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLR 85
>BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E isoform 1 protein.
Length = 226
Score = 74.1 bits (174), Expect = 5e-13
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
Q SN++NQARLKVL+
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLR 85
>BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E1 protein.
Length = 226
Score = 74.1 bits (174), Expect = 5e-13
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
Q SN++NQARLKVL+
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLR 85
>BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 65.3 bits (152), Expect = 2e-10
Identities = 39/83 (46%), Positives = 41/83 (49%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
S M NQARLKVL+
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLR 85
>BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 65.3 bits (152), Expect = 2e-10
Identities = 39/83 (46%), Positives = 41/83 (49%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
S M NQARLKVL+
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLR 85
>AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ25326 fis, clone TST00424. ).
Length = 226
Score = 65.3 bits (152), Expect = 2e-10
Identities = 39/83 (46%), Positives = 41/83 (49%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
S M NQARLKVL+
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLR 85
>AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein.
Length = 226
Score = 65.3 bits (152), Expect = 2e-10
Identities = 39/83 (46%), Positives = 41/83 (49%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
S M NQARLKVL+
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLR 85
>AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit
protein.
Length = 226
Score = 65.3 bits (152), Expect = 2e-10
Identities = 39/83 (46%), Positives = 41/83 (49%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QR
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLK 375
S M NQARLKVL+
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLR 85
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.66
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +1
Query: 601 PXRXFFFXKXPXPXKFFCPPXT--PXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXP 774
P R P P + + PP P P PP PP PP P P
Sbjct: 327 PSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP 386
Query: 775 PP 780
PP
Sbjct: 387 PP 388
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.66
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +1
Query: 601 PXRXFFFXKXPXPXKFFCPPXT--PXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXP 774
P R P P + + PP P P PP PP PP P P
Sbjct: 327 PSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP 386
Query: 775 PP 780
PP
Sbjct: 387 PP 388
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.88
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +1
Query: 601 PXRXFFFXKXPXPXKFFCPPXT--PXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXP 774
P R P P + + PP P P PP PP PP P P
Sbjct: 327 PSRPSVEVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP 386
Query: 775 PP 780
PP
Sbjct: 387 PP 388
>M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein.
Length = 638
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -1
Query: 779 GGGXXGXXGGXXXGGXXXXFXKXAPGGXKPGXXXPPXGVWGGQKNFXGXGXF 624
GGG G GG GG GG GV+GG +F G G F
Sbjct: 95 GGGFGGSYGGGFGGGRGVGSGFGGAGGFGGAGGFGGPGVFGGPGSFGGPGGF 146
>AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein.
Length = 638
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -1
Query: 779 GGGXXGXXGGXXXGGXXXXFXKXAPGGXKPGXXXPPXGVWGGQKNFXGXGXF 624
GGG G GG GG GG GV+GG +F G G F
Sbjct: 95 GGGFGGSYGGGFGGGRGVGSGFGGAGGFGGAGGFGGPGVFGGPGSFGGPGGF 146
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G PG PPG PP PP PPP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP 275
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G PG PPG PP PP PPP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP 275
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXG----GKXXPGXXPPGAXFXXXXXXPPXXX---PPXXPXXPPP 780
P P PP TP G G+ P PP A PP PP P PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXG----GKXXPGXXPPGAXFXXXXXXPPXXX---PPXXPXXPPP 780
P P PP TP G G+ P PP A PP PP P PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXG----GKXXPGXXPPGAXFXXXXXXPPXXX---PPXXPXXPPP 780
P P PP TP G G+ P PP A PP PP P PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXG----GKXXPGXXPPGAXFXXXXXXPPXXX---PPXXPXXPPP 780
P P PP TP G G+ P PP A PP PP P PPP
Sbjct: 356 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 412
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G PG PPG PP PP PPP
Sbjct: 276 PPLGPPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP 312
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G PG PPG PP PP PPP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVL-----PPPLAGPPNRGDRPPP 275
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXG----GKXXPGXXPPGAXFXXXXXXPPXXX---PPXXPXXPPP 780
P P PP TP G G+ P PP A PP PP P PPP
Sbjct: 344 PVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPP--XXPXXPPP 780
P P F PP P PG PP + PP PP P PPP
Sbjct: 318 PPPPASFPPPAIPP---PTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPP 366
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 6.2
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +1
Query: 601 PXRXFFFXKXPXPXKFFCPPXTPX--GGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXP 774
P R P P + + PP P PP PP PP P P
Sbjct: 327 PSRPSVAVPPPPPNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPP 386
Query: 775 PP 780
PP
Sbjct: 387 PP 388
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,490,353
Number of Sequences: 237096
Number of extensions: 1743705
Number of successful extensions: 5677
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4742
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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