Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B19
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h at... 70 2e-12
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.40
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 2.8
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.0
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 6.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 6.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.7
>AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h
atpase protein 8 protein.
Length = 226
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/88 (44%), Positives = 44/88 (50%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
+SD DVQKQ++HMMAFIEQ FNIEKGRLVQQQR
Sbjct: 3 ISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKKEK 62
Query: 307 XXXXXXXXQSSNMLNQARLKVLKVPEXH 390
Q+SN LN RL+ LK E H
Sbjct: 63 QVELQRKIQASNSLNAGRLRCLKAREDH 90
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 652 CPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
CPP P P PP PP PP P PPP
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Frame = +1
Query: 616 FFXKXPXPXKFFCPPXTPXGGKXXP-----GXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
FF P P F PP P G P G PP PP P P PPP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP--PPPPPP 120
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +1
Query: 631 PXPXKF-FCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P F F T G+ P PPG PP P P PPP
Sbjct: 671 PPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPP 721
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P F P P + P PP + F PP PP PPP
Sbjct: 189 PPPPSFNINPFQPMFSQPPPPPLPPNSQF----MTPPPRPPPAPFSIPPP 234
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXP--GXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P G P G PP PP P PPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXP--GXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P G P G PP PP P PPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXP--GXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P G P G PP PP P PPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -1
Query: 779 GGGXXGXXGGXXXG-GXXXXFXKXAPGGXKPGXXXPPXGVWGGQ 651
GGG G GG G G + GG G G WGGQ
Sbjct: 53 GGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQ 96
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G + G PPG + PP P P P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYP 721
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P G + G PPG + PP P P P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYP 721
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P PP T GG P PPG PP PP PPP
Sbjct: 728 PPPPPGGLPPIT--GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P PP T GG P PPG PP PP PPP
Sbjct: 728 PPPPPGGLPPIT--GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P PP T GG P PPG PP PP PPP
Sbjct: 311 PPPPPGGLPPIT--GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,377,754
Number of Sequences: 27780
Number of extensions: 231222
Number of successful extensions: 601
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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