Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B19
(782 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 36 0.030
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.28
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 1.5
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 30 1.5
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 30 1.5
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 30 2.0
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 30 2.0
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 2.6
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 2.6
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 2.6
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 4.6
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 6.1
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 28 6.1
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 28 6.1
At1g61080.1 68414.m06877 proline-rich family protein 28 6.1
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 28 6.1
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 28 8.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 8.0
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 127 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRXXXXXXXXXXXX 306
++DADV KQI+ M+ FI Q FNIE+ +L++ +
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 307 XXXXXXXXQSSNMLNQARLKVLKVPE 384
S LN +R+K L+ +
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQD 86
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/88 (25%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Frame = +3
Query: 519 PXPXNRKGPGWNPRPXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXPXGGXXXXXFX 698
P P P ++P P P P S P P ++ PP P +
Sbjct: 454 PPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPP--SPPPPPPPVYSPPPPPPPPPPPPVYS 511
Query: 699 PPGGXFXKXXXXPPXXXP-PXXTXXPPP 779
PP PP P P PPP
Sbjct: 512 PPPPPVYSSPPPPPSPAPTPVYCTRPPP 539
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/88 (23%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Frame = +3
Query: 519 PXPXNRKGPGWNPRPXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXPXGGXXXXXFX 698
P P P ++P P P P + P P ++ PP P
Sbjct: 470 PPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPP---PPPPPPPVYSPPPPPVYSSPPPPPS 526
Query: 699 P-PGGXFXKXXXXPPXXXPPXXTXXPPP 779
P P + PP PP PPP
Sbjct: 527 PAPTPVYCTRPPPPPPHSPPPPQFSPPP 554
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P P PP P PP P PPP
Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPP 492
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXP-PGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P P P P + PP PP PPP
Sbjct: 504 PPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP 554
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP P P P P PP P PPP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPP 507
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP PP PP PPP
Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPP 515
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +3
Query: 555 PRPXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXPXGGXXXXXFXPPGGXFXKXXXX 734
P P +P P S P P PP P F PP +
Sbjct: 527 PPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVY---SPP 583
Query: 735 PPXXXPPXXTXXPPP 779
PP PP PPP
Sbjct: 584 PPVHSPPPPVHSPPP 598
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP PP PP P PP
Sbjct: 518 PPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPP 559
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPP 777
P P + P +P GG P PG P PP P PP
Sbjct: 141 PPPEQLPPPASSPQGGPKKPKKHHPGPATSPPAPSAPATSPPAPPNAPP 189
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P CPP P P PP PP P P PPP
Sbjct: 54 PEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPP 103
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +3
Query: 630 PXPXKIFLSPPXPXGGXXXXXFXPPGGXFXKXXXXPPXXXPPXXTXXPPP 779
P P ++ SPP P + PP + PP PP PPP
Sbjct: 404 PPPPYVYPSPPPPPPSPPPYVYPPPPPPY----VYPPPPSPPYVYPPPPP 449
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP + PP PP PPP
Sbjct: 388 PPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPP 429
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 646 FFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
F C P +P P PP PP P P PPP
Sbjct: 372 FGCSPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPP 416
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP + PP P P PPP
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/94 (24%), Positives = 29/94 (30%), Gaps = 7/94 (7%)
Frame = +3
Query: 519 PXPXNRKGPGWNPRPXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXPXGG----XXX 686
P P P P +P P + S + P P ++ SPP P
Sbjct: 476 PPPYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPSPPPPCPE 535
Query: 687 XXFXPPGGXFXKXXXXPPXXXP---PXXTXXPPP 779
PP + PP P P T PPP
Sbjct: 536 SSPPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPP 569
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P + PP TP P PP P PP P PPP
Sbjct: 613 PPPSPLYYPPVTPSPPPPSPVYYPP--VTPSPPPPSPVYYPPVTPSPPPP 660
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/81 (23%), Positives = 24/81 (29%), Gaps = 6/81 (7%)
Frame = +3
Query: 555 PRPXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXP------XGGXXXXXFXPPGGXF 716
P P +P P + P P ++ SPP P PP +
Sbjct: 460 PPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVY 519
Query: 717 XKXXXXPPXXXPPXXTXXPPP 779
PP PP PPP
Sbjct: 520 SSPPPPPPSPPPPCPESSPPP 540
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 57 LIFLALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 170
L+ +LY P + +VLK S + A +CR E ++ +G
Sbjct: 504 LVVGSLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 541
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 57 LIFLALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 170
L+ +LY P + +VLK S + A +CR E ++ +G
Sbjct: 501 LVVGSLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 538
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPP 777
PP +P P PP PP PP P PP
Sbjct: 51 PPPSPPPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPP 91
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP A F PP PP P PPP
Sbjct: 1081 PPSPPLPPSSLP-PPPPAALFPPLP--PPPSQPPPPPLSPPP 1119
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +1
Query: 637 PXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P F PP P P PP + + PP P PPP
Sbjct: 34 PPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPPPPP 81
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/73 (21%), Positives = 22/73 (30%)
Frame = +3
Query: 561 PXKTPXPXXXXFXSXKXXFFXKXPXPXKIFLSPPXPXGGXXXXXFXPPGGXFXKXXXXPP 740
P P P + S + P P ++ SPP + PP +
Sbjct: 29 PYSPPSPPPYVYSSPPPYTYSPPPSPY-VYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYV 87
Query: 741 XXXPPXXTXXPPP 779
PP PPP
Sbjct: 88 YSSPPPYAYSPPP 100
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 655 PPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
PP P P PP PP PP P PPP
Sbjct: 67 PPLPPRFELPPPLFPPPPLPRLPPPLLPPPEEPPREPPPPPP 108
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 631 PXPXKFFCPPXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P PP P + PP PP PP PPP
Sbjct: 515 PLPTTIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPP 564
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187;
contains Pfam profile PF02845: CUE domain
Length = 1973
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 651 LSPPXPXGGXXXXXFXPPGGXFXKXXXXPPXXXPPXXTXXPPP 779
L PP P G PP + PP PP PPP
Sbjct: 845 LYPPPPLGHSLPSVLQPPLQPQSQPPEPPPEMMPPPPQALPPP 887
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 658 PXTPXGGKXXPGXXPPGAXFXXXXXXPPXXXPPXXPXXPPP 780
P P G P PP PP PP PPP
Sbjct: 1119 PSFPAGSPPLPHESPPSPPPQPPSSPPPPSSPPQLAPAPPP 1159
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 630 PXPXKIFLSPPXPXGGXXXXXFXPPGGXFXKXXXXPPXXXPPXXTXXPPP 779
P P I+ PP P PP PP PP PPP
Sbjct: 743 PPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPP--PPVHSPPPPVHSPPP 790
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,808,397
Number of Sequences: 28952
Number of extensions: 228281
Number of successful extensions: 1392
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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