Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B18
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 150 TKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLS 272
           TK   K+ +I   +  +F+T  + F YC ++    FN++ S
Sbjct: 484 TKQQSKIHLI---VRSVFVTTYLMFDYCTVLRVQRFNNYQS 521


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 161 RSFRCVFLIQFW 126
           R+FRCVF++  W
Sbjct: 43  RTFRCVFVLDPW 54


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/34 (20%), Positives = 21/34 (61%)
 Frame = +1

Query: 130 NCIKNTQRKLLRSLK*LMHTFSIFSLLRSYNSAT 231
           +C+++   K++++ + L H F + +L+ ++   T
Sbjct: 258 DCVRSEASKVVKNAQKLRHKFDLKTLVLNFPKFT 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,962
Number of Sequences: 336
Number of extensions: 3973
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)