Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B18
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89080-1|CAA61451.1|  113|Caenorhabditis elegans dad-1 protein.       140   9e-34
AF039713-4|AAB96727.1|  113|Caenorhabditis elegans Dad (defender...   140   9e-34
Z79600-9|CAJ85761.1|  110|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z79600-8|CAJ85760.1|  147|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U40800-2|AAA81489.2|  137|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    28   7.7  

>X89080-1|CAA61451.1|  113|Caenorhabditis elegans dad-1 protein.
          Length = 113

 Score =  140 bits (340), Expect = 9e-34
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 105 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 284
           + +  V+ KL+ +Y   T  KLKIIDAY+ YI  T + QF YC LVGTFPFNSFLSGFIS
Sbjct: 3   AQVVPVLSKLFDDYQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFIS 62

Query: 285 TVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLH 413
           TV+ FVL  CLR+QVN EN++EF  +S ER FADFIFA+L+LH
Sbjct: 63  TVTSFVLASCLRMQVNQENRSEFTAVSTERAFADFIFANLILH 105


>AF039713-4|AAB96727.1|  113|Caenorhabditis elegans Dad (defender
           against apoptoticdeath) homolog protein 1 protein.
          Length = 113

 Score =  140 bits (340), Expect = 9e-34
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 105 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 284
           + +  V+ KL+ +Y   T  KLKIIDAY+ YI  T + QF YC LVGTFPFNSFLSGFIS
Sbjct: 3   AQVVPVLSKLFDDYQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFIS 62

Query: 285 TVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLH 413
           TV+ FVL  CLR+QVN EN++EF  +S ER FADFIFA+L+LH
Sbjct: 63  TVTSFVLASCLRMQVNQENRSEFTAVSTERAFADFIFANLILH 105


>Z79600-9|CAJ85761.1|  110|Caenorhabditis elegans Hypothetical
           protein F59C6.14b protein.
          Length = 110

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 162 KKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 284
           K +  IDA +F   +T ++   YC   G F    +L GF+S
Sbjct: 70  KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 109


>Z79600-8|CAJ85760.1|  147|Caenorhabditis elegans Hypothetical
           protein F59C6.14a protein.
          Length = 147

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 162 KKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 284
           K +  IDA +F   +T ++   YC   G F    +L GF+S
Sbjct: 107 KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 146


>U40800-2|AAA81489.2|  137|Caenorhabditis elegans Hypothetical
           protein D2096.5 protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 168 LKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 302
           + ++  ++F +F + V       LV TF FN FLS  +STV  FV
Sbjct: 6   VSLLSVFIFLLFSSEVE-----ALVTTFHFNGFLSCGLSTVDFFV 45


>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
 Frame = +3

Query: 129 KLYQEYTTKTPKKLKIID------AYLFY--IFLTAVIQFGYCCLVG 245
           K+Y E+TT T  ++ II+       YLF   + LT  + F   C++G
Sbjct: 102 KIYSEFTTNTTSEMIIIEKTLWDVPYLFIGSVMLTHYMAFSVTCMIG 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,339,859
Number of Sequences: 27780
Number of extensions: 371765
Number of successful extensions: 879
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)