Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B17
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95...   176   2e-44
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009...   166   2e-41
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95...   148   7e-36
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416    108   7e-24
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821...    30   2.9  

>08_01_0119 -
           951492-951679,951780-951918,952023-952095,952196-952218
          Length = 140

 Score =  176 bits (428), Expect = 2e-44
 Identities = 81/114 (71%), Positives = 96/114 (84%)
 Frame = +3

Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
           MGRMH+ GKGIS SA+PY+R+ P+W+K  A DV+E I K  KKG  PSQIGV+LRD HG+
Sbjct: 1   MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGI 60

Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
             V+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFR
Sbjct: 61  PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFR 114



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 24/34 (70%)
 Frame = +1

Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWK 549
           K K +   LILVESRIHRLARYYK    LPP WK
Sbjct: 107 KDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140


>07_03_0978 +
           23099690-23100108,23100530-23100564,23100868-23100926,
           23101269-23101310,23102003-23102065,23102172-23102253,
           23102570-23102609,23102657-23102753
          Length = 278

 Score =  166 bits (404), Expect = 2e-41
 Identities = 75/114 (65%), Positives = 94/114 (82%)
 Frame = +3

Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
           MGRMH+ GKG+S S LPYRR+ P W+K +A +V+E I ++ KKG  PSQIG +LRD+H V
Sbjct: 1   MGRMHSSGKGMSCSVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAV 60

Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
              + VTG KILR++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFR
Sbjct: 61  PLAQGVTGGKILRVLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFR 114



 Score = 37.1 bits (82), Expect = 0.019
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +1

Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWK 549
           K K     LILVESR+HRL RYY+    +P  +K
Sbjct: 107 KDKDTKFRLILVESRVHRLTRYYRLAKKIPAFFK 140


>08_01_0120 -
           957365-957552,957642-957780,957847-957970,958398-958486
          Length = 179

 Score =  148 bits (358), Expect = 7e-36
 Identities = 77/123 (62%), Positives = 89/123 (72%), Gaps = 17/123 (13%)
 Frame = +3

Query: 153 KGISQSALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIG 281
           KGIS SALPY+R+ P+WLK  A DV                 +E I K  KKG  PSQIG
Sbjct: 31  KGISSSALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIG 90

Query: 282 VMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDS 461
           V+LRD HG+  V+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDS
Sbjct: 91  VVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDS 150

Query: 462 KFR 470
           KFR
Sbjct: 151 KFR 153



 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 24/34 (70%)
 Frame = +1

Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWK 549
           K K +   LILVESRIHRLARYYK    LPP WK
Sbjct: 146 KDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 179


>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
          Length = 218

 Score =  108 bits (259), Expect = 7e-24
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = +3

Query: 222 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYL 401
           +V+E I K  K G   SQIGV+LR  HG+  V+ +   KIL I+KA GLAP + EDLY+L
Sbjct: 89  EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKILHILKAHGLAPKILEDLYFL 148

Query: 402 IKKAVAMRKHLERNRKDKDSKFR 470
           IKKAVA+RKHLERNRKDKDS FR
Sbjct: 149 IKKAVAIRKHLERNRKDKDSSFR 171



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +1

Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPP 540
           K K ++  LILVESRIHRL RYYK    LPP
Sbjct: 164 KDKDSSFRLILVESRIHRLVRYYKRTKKLPP 194


>01_06_1243 -
           35681569-35681712,35681799-35681904,35682054-35682149,
           35682234-35682361,35683000-35683260,35683343-35683428,
           35683524-35683616,35683720-35683815,35683946-35684300
          Length = 454

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 165 GRYPYQERAYDPCLRLFT 112
           GRYP+  RAYDPC   ++
Sbjct: 295 GRYPWLSRAYDPCTERYS 312


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,217
Number of Sequences: 37544
Number of extensions: 307817
Number of successful extensions: 781
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)