Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B17
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 221 2e-57
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 221 2e-57
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 221 2e-57
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 221 2e-57
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 221 2e-57
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 221 2e-57
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 221 2e-57
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 221 2e-57
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 194 3e-49
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 221 bits (541), Expect = 2e-57
Identities = 103/114 (90%), Positives = 111/114 (97%)
Frame = +3
Query: 129 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 308
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 309 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 114
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 582
K K A LIL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 107 KDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 194 bits (474), Expect = 3e-49
Identities = 92/103 (89%), Positives = 99/103 (96%)
Frame = +3
Query: 162 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 341
SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 342 LRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 470
LRI+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFR
Sbjct: 61 LRILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFR 103
Score = 31.1 bits (67), Expect = 5.8
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 448 KTKTANSGLILVESRIHRLAR 510
K K A LIL+ESRIHRLAR
Sbjct: 96 KDKDAKFRLILIESRIHRLAR 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,890,103
Number of Sequences: 237096
Number of extensions: 1667856
Number of successful extensions: 3766
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3766
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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