Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B16
         (931 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   7.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   7.8  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 742 FGXPXSGFPPPXXLPXP 792
           +G P SG  PP  +P P
Sbjct: 65  YGGPPSGGQPPQGMPYP 81


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 561 NFTNKAFFSXH 529
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 561 NFTNKAFFSXH 529
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 122 KYGTR-YGASLRKMVKKMEVTQHAKYTCSFCGK 217
           KY  R +  S   ++ +   T    Y+C  CGK
Sbjct: 83  KYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 751 PXSGFPPPXXLPXPPR 798
           P SG P P   P PP+
Sbjct: 312 PYSGTPTPMMSPAPPQ 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,262
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)