BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_B16 (931 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082 SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 31 1.8 SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 30 2.3 SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_23131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) 28 9.4 >SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 669 Score = 35.1 bits (77), Expect = 0.082 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = -2 Query: 843 LGGXFKTGXXGNXKGPGGXGEXXGGGETGXXXPKXGKXGXFPGGVG 706 LGG TG G G GG GGG TG G G GG G Sbjct: 241 LGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGG 286 Score = 31.9 bits (69), Expect = 0.76 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Frame = -2 Query: 840 GGXFKTGXXGNXKGPGGXGEXXGGGETGXXX-PKXGKXGXFPGGVG 706 GG TG G G GG GGG TG G G GGVG Sbjct: 284 GGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVG 329 >SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) Length = 186 Score = 30.7 bits (66), Expect = 1.8 Identities = 19/45 (42%), Positives = 19/45 (42%) Frame = -2 Query: 840 GGXFKTGXXGNXKGPGGXGEXXGGGETGXXXPKXGKXGXFPGGVG 706 GG TG G G GG GGG TG G G GGVG Sbjct: 85 GGGGATGDGGGATGGGGGATGGGGGATG------GHGGATGGGVG 123 >SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) Length = 765 Score = 30.3 bits (65), Expect = 2.3 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 840 GGXFKTGXXGNXKGPGGXGEXXGGGETGXXXPKXGKXGXFPGGVGXXSLXXGEN 679 GG G G G GG G GGG G G G GG G G++ Sbjct: 659 GGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAGAGDD 712 >SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 29.5 bits (63), Expect = 4.1 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +1 Query: 706 PNPPGEXPXFAXFGXPXSG-FPPPXXLPXPP 795 PNPP P A + P + +PPP P PP Sbjct: 112 PNPPYPPPPNAPYPPPPNPPYPPPPNAPYPP 142 Score = 29.1 bits (62), Expect = 5.4 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +1 Query: 706 PNPPGEXPXFAXFGXPXSGFPPPXXLPXPP 795 PNPP P + + P +PPP P PP Sbjct: 90 PNPPYPPPPYPPY-PPPPPYPPPPNPPYPP 118 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +1 Query: 706 PNPPGEXPXFAXFGX-PXSGFPPPXXLPXPP 795 PNPP P A + P + +PPP P PP Sbjct: 128 PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPP 158 >SB_23131| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 91 Score = 28.3 bits (60), Expect = 9.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 Query: 98 TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 202 T+ GIT T Y +S +K+V + T+ A TC Sbjct: 19 TRWSGITCMMSTHYSSSYKKLVPRQLTTRWASITC 53 >SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) Length = 351 Score = 28.3 bits (60), Expect = 9.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 140 GASLRKMVKKMEVTQHAKYTCSFCGK 217 G +K ++ E++ H KY CS CGK Sbjct: 210 GGVTKKQIQSNEIS-HKKYVCSTCGK 234 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,894,527 Number of Sequences: 59808 Number of extensions: 381545 Number of successful extensions: 907 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 884 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2705204627 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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