Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B15
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 31 0.88
12_02_1174 - 26696869-26698191 31 1.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 31 1.5
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 25 3.1
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 29 3.6
02_01_0105 - 775740-776624,777633-778268 29 3.6
10_08_0237 - 16085539-16086120 29 4.7
02_01_0068 + 488943-490457 29 4.7
12_01_0399 + 3152219-3152721,3152995-3153127,3155013-3155097,315... 29 6.2
10_02_0009 + 4128909-4130123 29 6.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.2
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 29 6.2
01_01_1001 - 7925858-7926559 29 6.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 24 6.6
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 28 8.2
02_04_0175 + 20642877-20643618,20643844-20643955,20644052-206441... 28 8.2
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 8.2
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 28 8.2
05_07_0031 - 27183252-27183317,27183542-27184282 23 9.7
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/89 (21%), Positives = 42/89 (47%)
Frame = -1
Query: 293 SPETASQGDVSKKHPIKAFRESIFPTKASISRSSFSELYVSLQ*TAANSAKHST*KPFIL 114
SPE Q + H I ++F +A R + S+ + + N + + +PFI+
Sbjct: 137 SPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEVNPSLPPSFEPFIM 196
Query: 113 NYSLQLIRKIILYSAHAELLNQESNLKNS 27
N++++ + + ++ H L E ++K +
Sbjct: 197 NFNMKNLNRTLI-ELHGMLKTAEESIKKN 224
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPG 629
P L P PP PPP P + PG
Sbjct: 214 PTLPPPSPPPPPPTVPPRTPG 234
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGPRILP 644
P L P PP PPP P V P + P
Sbjct: 183 PSLQPPSPPPPPPTRPPSVKPPVVQP 208
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQ--VPGPRILP 644
P L P PP PPP P + VPG +LP
Sbjct: 246 PGLPLPPPPPPPPGPPPREIVPGQTLLP 273
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGP 632
P PP PPP P P P
Sbjct: 110 PAPPLPPPPAPAPPPTP 126
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P + P PP PPP
Sbjct: 65 PTVTTPTPPPPPP 77
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 646 KGRIRGPGTXXGXXGGGXGGXGLXSTG 566
KGR RG G G GGG GG G G
Sbjct: 6 KGRHRGRGGGGGGGGGGGGGGGGGGVG 32
>02_01_0105 - 775740-776624,777633-778268
Length = 506
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 7 LLPXHYREFLRFDSWFKSSACAEYRII 87
+LP HY +R D+W CAE R++
Sbjct: 106 VLPRHYAAGVRADTWAVFHGCAERRVV 132
>10_08_0237 - 16085539-16086120
Length = 193
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 643 GRIRGPGTXXGXXGGGXGGXGLXSTGXKFN*GTNYSYRRANS 518
G G G GGG G STG GT Y ANS
Sbjct: 109 GEYSSAGGSGGGGGGGQGNGNYGSTGQGSGSGTGSGYSDANS 150
>02_01_0068 + 488943-490457
Length = 504
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 245 LLDAS*KHPLATLFPGISKRTFLKLWQKHVA 337
+L A P+ + FP I+KR F W HVA
Sbjct: 214 MLRAFTSFPVFSFFPAITKRLFRNQWAAHVA 244
>12_01_0399 +
3152219-3152721,3152995-3153127,3155013-3155097,
3155321-3155586
Length = 328
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGPR 635
P + P PP PPP P PR
Sbjct: 57 PAISDPTPPPPPPMAATPAPAPR 79
>10_02_0009 + 4128909-4130123
Length = 404
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGP 632
P PP PPP P Q P P
Sbjct: 82 PSPPPPPPPPPPQQPAP 98
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 561 LXPVLXXPXPPXPPPXXPXQVPGPRILP 644
L P L P PP P P P P P LP
Sbjct: 1175 LSPSLPPPPPPPPLPSGPPPQPAPPPLP 1202
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGPRILPFSE 653
P P PP PPP P +P P F+E
Sbjct: 424 PPYAPPPPPPPPPPPPQALPLPGSYNFAE 452
>01_01_1001 - 7925858-7926559
Length = 233
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPRILPFSEG*XGSP 671
PP PPP P Q P LPFS+ SP
Sbjct: 27 PPPPPPPPPRQ---PETLPFSDTMTASP 51
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 24.2 bits (50), Expect(2) = 6.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPRILP 644
PP PPP P +P R++P
Sbjct: 634 PPPPPPPPPPSLPN-RLVP 651
Score = 22.6 bits (46), Expect(2) = 6.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 561 LXPVLXXPXPPXPPPXXP 614
+ P P PP PPP P
Sbjct: 611 ILPNRSVPPPPPPPPPLP 628
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRILP 644
P PP PP P VP PRILP
Sbjct: 20 PPPPPPPRAQPALVP-PRILP 39
>02_04_0175 +
20642877-20643618,20643844-20643955,20644052-20644174,
20644258-20644509,20644510-20644639,20644719-20644928,
20645280-20645426
Length = 571
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 561 LXPVLXXPXPPXPPPXXPXQVPGPRILPFSEG 656
L VL P PP PPP P P + + G
Sbjct: 96 LAQVLQMPAPPPPPPPMAAAAPPPETVQIATG 127
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGP 632
P L P PP PPP P P P
Sbjct: 349 PKLMPPPPPPPPPPPPPPPPPP 370
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 570 VLXXPXPPXPPPXXPXQVPGPRILP 644
++ P PP PPP P P PR P
Sbjct: 351 LMPPPPPPPPPPPPPPPPPPPRPPP 375
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRILPFSEG*XGSPT 674
P P PPP P +VP P P E SP+
Sbjct: 8 PAPDRPPPPVPVRVPVPEPQPEPETPQASPS 38
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVP 626
P PP PPP P P
Sbjct: 151 PPPPPPPPLLPMAQP 165
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P L P PP PPP
Sbjct: 145 PELKAPPPPPPPP 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,060,686
Number of Sequences: 37544
Number of extensions: 426952
Number of successful extensions: 2517
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -