Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B15
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z83319-3|CAB05905.1| 74|Caenorhabditis elegans Hypothetical pr... 29 5.5
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 7.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 7.9
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical
protein F22B8.1 protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 22 YREFLRFDSWFKSSACAEYRIIFRINWRL*FKMKGF-YVLCFALFAAVYCKETYSSENDD 198
YR + F S F SS Y II +++ L + GF + + + A + TY +
Sbjct: 125 YRYMVLFRSTFLSSCFIPYGIICSVSYCL--TIIGFTFTMAYFWMVADTERLTYMQ---N 179
Query: 199 LDIEALVGNIDSLKAFIGCFLETSP 273
+ +E N+D L FI + ETSP
Sbjct: 180 IFLEEFNQNVDDLNIFIVIYHETSP 204
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRIL 641
P PP PPP P P PR++
Sbjct: 182 PKPPPPPPIPPPGPPPPRVI 201
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRIL 641
P PP PPP P P PR++
Sbjct: 182 PKPPPPPPIPPPGPPPPRVI 201
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 561 LXPVLXXPXPPXPPPXXPXQVPGPRILPFSEG*XGSPT 674
+ P++ P PP PPP P P P+ S SPT
Sbjct: 348 IPPIISPPAPPPPPPPPPPP-PPPQTPSASSSVTFSPT 384
>Z83319-3|CAB05905.1| 74|Caenorhabditis elegans Hypothetical
protein T02D1.7 protein.
Length = 74
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 118 MKGFYVLCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIG 252
M+ ++L ++ + ++ + +D DIEAL+G D + AF+G
Sbjct: 1 MQFLHILLLSILSLIFISSVQAVPSDQ-DIEALMGLQDQVNAFLG 44
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 613 GXXGGGXGGXGLXSTGXKFN*GTNYSY-RRANSKQRGRLKIDFLKN 479
G GGG GG G F G+NY NS + + K D K+
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGSNYDQGGNGNSGDQQKRKRDMAKD 100
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGP 632
PP PPP P P P
Sbjct: 302 PPPPPPPPPPPAPAP 316
Score = 21.8 bits (44), Expect(2) = 7.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P P PP PPP
Sbjct: 298 PAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGP 632
PP PPP P P P
Sbjct: 302 PPPPPPPPPPPAPAP 316
Score = 21.8 bits (44), Expect(2) = 7.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P P PP PPP
Sbjct: 298 PAAAPPPPPPPPP 310
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 567 PVLXXPXPPXPPP--XXPXQVPGPR 635
P+ P PP PPP P Q P P+
Sbjct: 79 PIAAVPPPPPPPPPQPAPAQAPAPK 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,349,220
Number of Sequences: 27780
Number of extensions: 347787
Number of successful extensions: 1437
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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