Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B15
(851 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21490.1 68415.m02557 dehydrin family protein contains Pfam d... 31 0.74
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 2.0
At1g28600.1 68414.m03522 lipase, putative similar to lipase [Ara... 29 3.9
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 24 4.2
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 5.2
At4g09270.1 68417.m01535 hypothetical protein same aa sequence a... 29 5.2
At4g09220.1 68417.m01528 hypothetical protein 29 5.2
At2g39250.1 68415.m04820 AP2 domain-containing transcription fac... 25 6.4
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 28 6.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 6.9
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ... 28 9.1
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 9.1
>At2g21490.1 68415.m02557 dehydrin family protein contains Pfam
domain, PF00257: Dehydrin
Length = 185
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 286 SGDFKKDIPEAVAEACGKCTPAQKHLFKRFLEVVKDKLP 402
SG K + A A G T Q H K LE +KDKLP
Sbjct: 139 SGKHKDEQTPATATTTGPATTDQPHEKKGILEKIKDKLP 177
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 546 VP*LNLXPVLXXPXPPXPPPXXPXQVPGPRILP 644
+P ++ P L P PP PPP P P R +P
Sbjct: 582 LPSRSIPPPLAQPPPPRPPPPPPPP-PSSRSIP 613
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRILP 644
P PP PPP +P P P
Sbjct: 599 PPPPPPPPPSSRSIPSPSAPP 619
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P+ P PP PPP
Sbjct: 567 PINKTPPPPPPPP 579
>At1g28600.1 68414.m03522 lipase, putative similar to lipase
[Arabidopsis thaliana] GI:1145627; contains InterPro
Entry IPR001087 Lipolytic enzyme, G-D-S-L family
Length = 393
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 365 NRCFWAGVHLPHASATASGMSFLKSPETASQGDVSKKHPIKAFRESI 225
NR F GV+ A ATA SFLK +VS +K+F++S+
Sbjct: 101 NRNFDKGVNFAVAGATALKSSFLKKRGIQPHTNVSLGVQLKSFKKSL 147
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PVLXXPXPPXPPP 605
P L P PP PPP
Sbjct: 684 PALPRPPPPPPPP 696
Score = 23.4 bits (48), Expect(2) = 4.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPR 635
PP PPP P P P+
Sbjct: 728 PPPPPPPPPPAPPTPQ 743
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGP 632
PV P PP PPP P P P
Sbjct: 447 PVYSPPPPPPPPPPPPVYSPPP 468
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 567 PVLXXPXPPXPPPXXPXQVPGP 632
PV P PP PPP P P P
Sbjct: 493 PVYSPPPPPPPPPPPPVYSPPP 514
>At4g09270.1 68417.m01535 hypothetical protein same aa sequence as
protein T8A17_30 because of location on repetitive
section
Length = 100
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPRIL 641
PP PPP P Q+ GP I+
Sbjct: 70 PPPPPPPLPAQMAGPAII 87
>At4g09220.1 68417.m01528 hypothetical protein
Length = 100
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPRIL 641
PP PPP P Q+ GP I+
Sbjct: 70 PPPPPPPLPAQMAGPAII 87
>At2g39250.1 68415.m04820 AP2 domain-containing transcription
factor, putative AP2_ARATH Floral homeotic protein
APETALA2.(SP:P47927){Arabidopsis thaliana}
Length = 222
Score = 24.6 bits (51), Expect(2) = 6.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGP 632
P PP PPP ++ GP
Sbjct: 58 PPPPPPPPPSENELSGP 74
Score = 22.2 bits (45), Expect(2) = 6.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 570 VLXXPXPPXPPP 605
+L P PP PPP
Sbjct: 53 ILPPPPPPPPPP 64
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 570 VLXXPXPPXPPPXXPXQVP-GPRILPF 647
+L P P PPP P Q+P GP+ LPF
Sbjct: 19 LLVLPPLPPPPPPPPPQLPFGPK-LPF 44
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRILP 644
P PP PPP P P P + P
Sbjct: 391 PPPPPPPPPPPPPPPPPYVYP 411
>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
similar to GT-2 factor [Arabidopsis thaliana GI:416490
Length = 619
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 588 PPXPPPXXPXQVPGPRILPF 647
PP PPP P Q R LPF
Sbjct: 17 PPPPPPLPPHQPAAERSLPF 36
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 582 PXPPXPPPXXPXQVPGPRI 638
P PP PPP P P P+I
Sbjct: 275 PQPPPPPPPKPQPPPPPKI 293
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,508,863
Number of Sequences: 28952
Number of extensions: 328986
Number of successful extensions: 1609
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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