Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B14
(1481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 35 0.19
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 34 0.33
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.44
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.44
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.77
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 2.4
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 2.4
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 3.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 5.4
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 5.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 5.4
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 7.2
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 9.5
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.7 bits (76), Expect = 0.19
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G +G PP P
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPP 680
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G G PP P
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPP 681
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 33.9 bits (74), Expect = 0.33
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G G PP P
Sbjct: 663 PPPPPPPPGGGVPGPPKPPPP 683
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G G PP P
Sbjct: 196 PPPPPPPPPGFPGGAPPPPPP 216
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G PP P
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPP 215
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP PP P G
Sbjct: 197 PPPPPPPPGFPGGAPPPPPPPFG 219
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.5 bits (73), Expect = 0.44
Identities = 25/98 (25%), Positives = 26/98 (26%), Gaps = 2/98 (2%)
Frame = +1
Query: 382 PXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPP--XPXXGXXX 555
P P P T P P T P PP A PPPPP P G
Sbjct: 110 PPPPPRAPETPSQAPSPPPPPTSPA----TRAPPPPPPIAPATGGPPPPPPIAPATGGPP 165
Query: 556 XAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
P+ PP PP PP
Sbjct: 166 PPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPP 203
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.77
Identities = 27/124 (21%), Positives = 28/124 (22%)
Frame = +1
Query: 367 PPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXG 546
P P P PP P P P PP Y PP P P
Sbjct: 85 PTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSP 144
Query: 547 XXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPPQXXXXXQXXXIXXPPXRXP 726
P P L P PP + PP PP P
Sbjct: 145 NAPYPPPPNPPYPPPLYPPPPN--PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAP 202
Query: 727 XXXP 738
P
Sbjct: 203 NPPP 206
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 367 PPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXP 537
PP P PP + P P P PP PPPPP P
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPP 990
Score = 29.1 bits (62), Expect = 9.5
Identities = 20/79 (25%), Positives = 23/79 (29%)
Frame = +1
Query: 820 APXGXXXLXSXPXXDSXXPXXAPPXXXXXPTQXXXPXXRPXXVXPPXDPXAXPXXXCXXX 999
+P G P P PP P+Q P PP A P
Sbjct: 913 SPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG-GAP 971
Query: 1000 XLXXXX*GAXXPPXXPPXP 1056
L G+ PP PP P
Sbjct: 972 PLPPPPGGSAPPPPPPPPP 990
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPPXGAXSGXXXPPXP 205
PP P PPPPP PP G PP P
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G PP P
Sbjct: 316 PPPPPPPPPPGDGGAPPPPPP 336
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G PP P
Sbjct: 317 PPPPPPPPPGDGGAPPPPPPP 337
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 367 PPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXP 537
PP P P PP P P + P PP PPP P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/71 (25%), Positives = 18/71 (25%)
Frame = +1
Query: 382 PXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXGXXXXA 561
P P PP P P P PP PPPPP P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 562 XPVXXPXXXNL 594
P P L
Sbjct: 426 PPPPPPPALRL 436
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP S PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPP 385
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP A PP P
Sbjct: 409 PPPPPPPPPPAPPPPPPPPPP 429
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXGXR 217
PPPP PP G PP P G R
Sbjct: 1236 PPPPAMPPDGPPKFMGLPPPPPGMR 1260
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G +G PP P
Sbjct: 740 PPPPPPPPPGC-AGLPPPPPP 759
Score = 30.3 bits (65), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G PP P
Sbjct: 712 PPPPPPPPPGCAGLPPPPPSP 732
Score = 29.1 bits (62), Expect = 9.5
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +1
Query: 355 KKXXPPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPX 534
KK PP P P + P P + P PP PPPPP
Sbjct: 674 KKVPPPP--PPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPS 731
Query: 535 PXXGXXXXAXPVXXP 579
P G P P
Sbjct: 732 PQPGCAGLPPPPPPP 746
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP + S PP P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPP 1180
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP S PP P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPP 1177
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP S PP P
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPP 1178
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 403 PPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXP 579
PPT P T K P PP PPPPP P G P P
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTN---GPPPPPPPTNGPPPPPPPTNGP 404
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.5 bits (58), Expect(2) = 3.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXP 205
PPPP PP G PP P
Sbjct: 755 PPPPPPPAVPGEGARPPPPP 774
Score = 21.4 bits (43), Expect(2) = 3.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 137 TXPPPPPXPP 166
T PPPP PP
Sbjct: 717 TLGPPPPAPP 726
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +1
Query: 481 PXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHX 660
P PP + +PPPPP + P P GG PP P
Sbjct: 329 PLPPPPLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPLGGPPPPPPGRRPPSGKI 385
Query: 661 XPP 669
PP
Sbjct: 386 NPP 388
Score = 29.9 bits (64), Expect = 5.4
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPPXGAXSGXXXPPXP 205
PPT ++ P + PPPPP P SG PP P
Sbjct: 349 PPTSTRSAPPPPPGRAPQPLGGPPPPP-PGRRPPSGKINPPPP 390
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPP 199
PPP P PP A SG PP
Sbjct: 6 PPPGPPPPPSAPSGPVKPP 24
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +1
Query: 481 PXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHX 660
P PP + +PPPPP + P P GG PP P
Sbjct: 241 PLPPPPLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPLGGPPPPPPGRRPPSGKI 297
Query: 661 XPP 669
PP
Sbjct: 298 NPP 300
Score = 29.9 bits (64), Expect = 5.4
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPPXGAXSGXXXPPXP 205
PPT ++ P + PPPPP P SG PP P
Sbjct: 261 PPTSTRSAPPPPPGRAPQPLGGPPPPP-PGRRPPSGKINPPPP 302
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.9 bits (64), Expect = 5.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 367 PPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPP 528
PP P P PP S P P K P PP + PPP
Sbjct: 208 PPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPP 261
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = -1
Query: 536 GXGGGGGEXXXXAXGGXXGXXXVWXXXTRXXGXXXGXXXEXXVGGXXXGXXGXXXGG 366
G GGGGG+ GG G + G G GG G G GG
Sbjct: 819 GGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 875
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXGXR 217
PPPPP PP G G PP P R
Sbjct: 363 PPPPPPPPVG---GPPPPPPPIEGR 384
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,343,628
Number of Sequences: 59808
Number of extensions: 168501
Number of successful extensions: 2643
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4789013016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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