Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_B14
         (1481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.6  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 143 PPPPPXPPXGAXSGXXXP 196
           PPPPP PP  + S    P
Sbjct: 783 PPPPPPPPPSSLSPGGVP 800



 Score = 25.0 bits (52), Expect = 5.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 143 PPPPPXPPXGAXSGXXXPP 199
           PPPPP PP     G    P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 144 PXPPXPPPRGP 176
           P PP PPP GP
Sbjct: 583 PAPPPPPPMGP 593



 Score = 24.2 bits (50), Expect = 9.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 146 PPPPXPPXGA 175
           PPPP PP GA
Sbjct: 530 PPPPPPPGGA 539


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,691
Number of Sequences: 2352
Number of extensions: 4583
Number of successful extensions: 41
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 173124270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)