Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B14
(1481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.056
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.056
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.056
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 35 0.17
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 35 0.17
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.52
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.52
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.52
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 2.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 2.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 4.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 24 7.0
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 25 7.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.056
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP G G PP P G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.39
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 469 TXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXP 648
T P P PPPPP P P P L G PP P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 649 PXHXXPP 669
P PP
Sbjct: 770 PPPPPPP 776
Score = 30.3 bits (65), Expect = 3.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXPXGXR 217
PPPP PP G PP P G +
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 137 TXPPPPPXPPXG--AXSGXXXPPXPXG 211
T PPPP PP G +G PP P G
Sbjct: 723 TGGPPPPPPPGGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.056
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP G G PP P G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.39
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 469 TXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXP 648
T P P PPPPP P P P L G PP P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 649 PXHXXPP 669
P PP
Sbjct: 770 PPPPPPP 776
Score = 30.3 bits (65), Expect = 3.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXPXGXR 217
PPPP PP G PP P G +
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 137 TXPPPPPXPPXG--AXSGXXXPPXPXG 211
T PPPP PP G +G PP P G
Sbjct: 723 TGGPPPPPPPGGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.056
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP G G PP P G
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPG 374
Score = 33.5 bits (73), Expect = 0.39
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 469 TXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXP 648
T P P PPPPP P P P L G PP P
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 649 PXHXXPP 669
P PP
Sbjct: 353 PPPPPPP 359
Score = 30.3 bits (65), Expect = 3.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXPXGXR 217
PPPP PP G PP P G +
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 137 TXPPPPPXPPXG--AXSGXXXPPXPXG 211
T PPPP PP G +G PP P G
Sbjct: 306 TGGPPPPPPPGGLPPITGGPPPPPPPG 332
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPPXGAXSGXXXPPXP 205
PP++ N P + + PPPPP PP S PP P
Sbjct: 469 PPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 382 PXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXP 537
P P PP P P P PP A PPPPP P
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPPXGAXSGXXXPPXP 205
PP++ N P + + PPPPP PP S PP P
Sbjct: 476 PPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 382 PXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXP 537
P P PP P P P PP A PPPPP P
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.1 bits (72), Expect = 0.52
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP GA + PP P
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.1 bits (72), Expect = 0.52
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP GA + PP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.52
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP GA + PP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPP 240
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP + + PP P G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXPXG 211
PPPPP PP + + PP P G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
P PPP PP G +G PP P
Sbjct: 536 PTPPPPPPVGMANGGPPPPPP 556
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/98 (23%), Positives = 26/98 (26%), Gaps = 3/98 (3%)
Frame = +1
Query: 382 PXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXS---PPPPPXPXXGXX 552
P P + P P L + T P P S P PPP P G
Sbjct: 488 PPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMA 547
Query: 553 XXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXP 666
P P +L G P PP P
Sbjct: 548 NGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 367 PPXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXP 537
PP P P PP P P + P PP PPPPP P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPP--QFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP S PP P
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP S PP P
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPP 176
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 490 PPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
PP SPPPP P P + R G PP PP PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 490 PPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
PP SPPPP P P + R G PP PP PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 490 PPXAKXYXSPPPPPXPXXGXXXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
PP SPPPP P P + R G PP PP PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/119 (23%), Positives = 28/119 (23%)
Frame = -1
Query: 737 GXXXGXRXGGXXIXXXXXXXXXXGGXXWXGGXXXXGGXXXXPPXLXXXRXXXXGXXTGXA 558
G G GG GG GG G PP G G
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
Query: 557 XXXXPXXGXGGGGGEXXXXAXGGXXGXXXVWXXXTRXXGXXXGXXXEXXVGGXXXGXXG 381
G GGGGG GG G G G GG G G
Sbjct: 133 CGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCG 191
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 143 PPPPPXPPXGAXSGXXXPPXP 205
PPPPP PP G PP P
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPP 59
Score = 29.5 bits (63), Expect = 6.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 481 PXXPPXAKXYXSPPPPPXP 537
P PP Y +PPPPP P
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 143 PPPPPXPPXGAXS-GXXXPPXP 205
PPPPP PP G + G PP P
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 143 PPPPPXPPXGAXS-GXXXPPXP 205
PPPPP PP G + G PP P
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPP 478
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXPXG 211
PPPP PP G PP P G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPG 597
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/93 (23%), Positives = 25/93 (26%)
Frame = +1
Query: 391 PXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPV 570
P PP + P P + T + P P PPPPP G
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGM----TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 571 XXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
P GG PP P PP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXPP 166
PP + +N P+ + PPPPP PP
Sbjct: 119 PPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 6.4
Identities = 29/123 (23%), Positives = 31/123 (25%)
Frame = +1
Query: 370 PXXXPXXPXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXGX 549
P P P P P P V + P P SPPPPP P
Sbjct: 74 PYQHPHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPA-PQHGDHEASPPPPPPPRKSR 132
Query: 550 XXXAXPVXXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPPQXXXXXQXXXIXXPPXRXPX 729
+ P P PP PP PP Q PP P
Sbjct: 133 AGGSSPPPPPPPR---------VPRTPPPRSPPPRR--PPMTPPSPQRRPPRTPPSPEPR 181
Query: 730 XXP 738
P
Sbjct: 182 NPP 184
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 146 PPPPXPPXGAXSGXXXPPXPXGXR 217
PPPP PP + +G PP P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPR 145
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/93 (23%), Positives = 25/93 (26%)
Frame = +1
Query: 391 PXXXPPTXXSXXXPXXXPXLRVXXXHTXKXPXXPPXAKXYXSPPPPPXPXXGXXXXAXPV 570
P PP + P P + T + P P PPPPP G
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGM----TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 571 XXPXXXNLXXXRXGGXXXXPPXXXXPPXHXXPP 669
P GG PP P PP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 104 PRXXWXSXXXXTXPPPPPXPP 166
PR PPPPP PP
Sbjct: 129 PRTCCPPPTPAAPPPPPPPPP 149
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 143 PPPPPXPPXGA 175
PPPPP PP A
Sbjct: 141 PPPPPPPPPPA 151
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 25.4 bits (53), Expect(2) = 7.1
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 481 PXXPPXAKXYXSPPPPPXP 537
P P Y PPPPP P
Sbjct: 335 PAAAPQVYHYAPPPPPPPP 353
Score = 22.2 bits (45), Expect(2) = 7.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 517 PPPPPXPXXG 546
PPPPP P G
Sbjct: 349 PPPPPHPQQG 358
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +2
Query: 77 PPTKXKNXEPRXXWXSXXXXTXPPPPPXP-PXGAXSGXXXPPXP 205
PP P + T PPPPP P P A PP P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAP 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,639,841
Number of Sequences: 27780
Number of extensions: 169144
Number of successful extensions: 2954
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4256331302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -