Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B13
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 300 4e-81
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 293 4e-79
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 282 9e-76
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 196 8e-50
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 111 4e-24
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 1e-08
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 1e-08
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 60 1e-08
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 60 1e-08
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein. 35 0.41
BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein. 34 0.54
BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein. 34 0.54
AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein. 34 0.54
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 300 bits (736), Expect = 4e-81
Identities = 142/166 (85%), Positives = 156/166 (93%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 293 bits (720), Expect = 4e-79
Identities = 140/166 (84%), Positives = 154/166 (92%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
LRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL+SP G GRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQG 183
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 282 bits (692), Expect = 9e-76
Identities = 136/166 (81%), Positives = 150/166 (90%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 323
R FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KDP+RLFEGNAL
Sbjct: 18 RSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNAL 77
Query: 324 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 503
L RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RV
Sbjct: 78 LWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRV 137
Query: 504 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGTCQEEEPPQGTG 641
RKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPG + + +G G
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQG 183
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 196 bits (478), Expect = 8e-50
Identities = 93/103 (90%), Positives = 100/103 (97%)
Frame = +3
Query: 288 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 467
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 468 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 596
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 111 bits (266), Expect = 4e-24
Identities = 50/56 (89%), Positives = 56/56 (100%)
Frame = +3
Query: 144 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE 311
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFE
Sbjct: 9 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +3
Query: 174 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 353
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 354 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 533
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 534 IV 539
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +3
Query: 174 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 353
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 354 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 533
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 534 IV 539
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +3
Query: 174 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 353
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 354 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 533
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 534 IV 539
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +3
Query: 174 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 353
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 354 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 533
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 534 IV 539
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +3
Query: 174 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 353
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 354 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 533
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 534 IV 539
+V
Sbjct: 149 LV 150
>AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein.
Length = 847
Score = 34.7 bits (76), Expect = 0.41
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Frame = +3
Query: 240 LARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLK--IEDFLE 413
LAR+R+A + + D +RL RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAASDSDPDEQRL--------RLLQRQEEDAKELK-EHVARRERAVREVLV 773
Query: 414 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 593
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 774 RALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSPA 829
Query: 594 GRPGTCQEEEPP 629
PGTC +PP
Sbjct: 830 RPPGTCPPVQPP 841
>BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.54
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +3
Query: 240 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 410
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 777
Query: 411 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 590
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 778 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 833
Query: 591 GGRPGTCQEEEPP 629
PGTC +PP
Sbjct: 834 ARPPGTCPPVQPP 846
>BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 34.3 bits (75), Expect = 0.54
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +3
Query: 240 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 410
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 723 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 777
Query: 411 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 590
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 778 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 833
Query: 591 GGRPGTCQEEEPP 629
PGTC +PP
Sbjct: 834 ARPPGTCPPVQPP 846
>AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein.
Length = 871
Score = 34.3 bits (75), Expect = 0.54
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +3
Query: 240 LARIRKAARELLTLEEKDPKRLFEGNALLR-RLVRIGVLDEKQMKLDYVLGLK--IEDFL 410
LAR+R+A + + DP + + L R RL++ D K++K ++V + + + L
Sbjct: 742 LARVRRALARAAS--DSDPDE--QASLLQRLRLLQRQEEDAKELK-EHVARRERAVREVL 796
Query: 411 ERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFG 590
R L + + A A +L +QR++ R +++ +R D G H SP
Sbjct: 797 VRALPVEELRVYCALLAGKAAVLAQQRNLDERIRLLQDQLDAIRDDLGHHAP----SPSP 852
Query: 591 GGRPGTCQEEEPP 629
PGTC +PP
Sbjct: 853 ARPPGTCPPVQPP 865
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,505,369
Number of Sequences: 237096
Number of extensions: 2366240
Number of successful extensions: 5189
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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