Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B12
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 175 2e-43
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 175 2e-43
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 175 2e-43
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 175 2e-43
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 175 2e-43
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 175 2e-43
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 175 2e-43
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 173 5e-43
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 173 7e-43
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 164 3e-40
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 162 2e-39
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 3e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.005
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.084
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 7.3
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 7.3
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 7.3
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 7.3
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 7.3
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 7.3
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 7.3
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 7.3
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 7.3
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 7.3
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 175 bits (426), Expect = 2e-43
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 173 bits (422), Expect = 5e-43
Identities = 78/98 (79%), Positives = 88/98 (89%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 173 bits (421), Expect = 7e-43
Identities = 78/98 (79%), Positives = 88/98 (89%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 164 bits (399), Expect = 3e-40
Identities = 75/98 (76%), Positives = 85/98 (86%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKL KLHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 162 bits (393), Expect = 2e-39
Identities = 73/98 (74%), Positives = 83/98 (84%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 266
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 267 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 270 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 380
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +3
Query: 198 KFVIRNIVEAAAVRDINDASVY 263
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.084
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 87 MTRKRRNGGRAKHGRGHVK 143
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 413
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,829,014
Number of Sequences: 237096
Number of extensions: 1479743
Number of successful extensions: 2786
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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