Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B10
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 217 6e-56
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 217 6e-56
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 217 6e-56
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 217 6e-56
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 217 6e-56
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 217 6e-56
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 217 6e-56
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 217 6e-56
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 215 2e-55
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 203 6e-52
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 138 2e-32
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 128 3e-29
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 123 1e-27
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 94 7e-19
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 43 0.001
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 31 4.3
BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding ... 31 4.3
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 31 4.3
BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,... 31 5.7
S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding pr... 31 7.5
M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein. 31 7.5
EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,... 31 7.5
BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,... 31 7.5
BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,... 31 7.5
BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,... 31 7.5
AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing pr... 31 7.5
AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing pr... 31 7.5
AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,... 31 7.5
AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,... 31 7.5
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 7.5
AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene po... 31 7.5
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 217 bits (529), Expect = 6e-56
Identities = 110/163 (67%), Positives = 124/163 (76%), Gaps = 7/163 (4%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 159
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 215 bits (524), Expect = 2e-55
Identities = 109/164 (66%), Positives = 124/164 (75%), Gaps = 7/164 (4%)
Frame = +1
Query: 91 KMLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVK 264
+MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 265 EQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPA 432
EQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R P G RP
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLT 127
Query: 433 RSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRG 561
R DR YRR+ PG DKKA+ G GSA + +F+GG+GRG
Sbjct: 128 RGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRG 168
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 203 bits (496), Expect = 6e-52
Identities = 104/151 (68%), Positives = 114/151 (75%), Gaps = 6/151 (3%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 268 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 435
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 436 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 528
DR YRR+ PG DKKA+ G GSA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSA 147
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 138 bits (335), Expect = 2e-32
Identities = 63/78 (80%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Frame = +1
Query: 115 RVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 288
R+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 289 YWYLTNEGIEYLRIFLHL 342
YWYLTNEGI+YLR +LHL
Sbjct: 61 YWYLTNEGIQYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 128 bits (309), Expect = 3e-29
Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 16/140 (11%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 270
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 271 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 414
FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 415 RPDAPARS---AEDRSAYRR 465
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRVYRR 142
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 123 bits (296), Expect = 1e-27
Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 16/140 (11%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 270
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 271 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 414
FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 415 RPDAPARS---AEDRSAYRR 465
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRLYRR 142
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 93.9 bits (223), Expect = 7e-19
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Frame = +1
Query: 94 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 267
MLMPK+N +AIYE LFKEGVMVAKKD H PKH EL + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG-SADLEFKGGYGRG 561
RP R DR YRR+ PG DKKA+ G G + +F+GG+GRG
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGLGQQPEFQFRGGFGRG 53
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 31.5 bits (68), Expect = 4.3
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 298 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 474
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1378 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1436
Query: 475 APGVAPHDKKADVG-PGSAD 531
PG + + D PGS +
Sbjct: 1437 PPGEHLVNGRMDFAFPGSTN 1456
>BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), delta protein.
Length = 269
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 343 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 522
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVAACAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 523 SADLEFK 543
E++
Sbjct: 189 RGSPEYR 195
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 31.5 bits (68), Expect = 4.3
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 298 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 474
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1377 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1435
Query: 475 APGVAPHDKKADVG-PGSAD 531
PG + + D PGS +
Sbjct: 1436 PPGEHLVNGRMDFAFPGSTN 1455
>BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 517 PGSADLEFKGGY 552
PGS + Y
Sbjct: 231 PGSQEHRDSNAY 242
>S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding
protein delta protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 343 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 522
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVGPCAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 523 SADLEFK 543
E++
Sbjct: 189 RGSPEYR 195
>M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 343 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 522
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVGPCAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 523 SADLEFK 543
E++
Sbjct: 189 RGSPEYR 195
>EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 517 PGSAD 531
PGS +
Sbjct: 329 PGSQE 333
>BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 517 PGSAD 531
PGS +
Sbjct: 231 PGSQE 235
>BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 517 PGSAD 531
PGS +
Sbjct: 231 PGSQE 235
>BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 517 PGSAD 531
PGS +
Sbjct: 231 PGSQE 235
>AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing
protein 1 beta protein.
Length = 691
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 517 PGSAD 531
PGS +
Sbjct: 231 PGSQE 235
>AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing
protein 1 alpha protein.
Length = 789
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 517 PGSAD 531
PGS +
Sbjct: 329 PGSQE 333
>AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 517 PGSAD 531
PGS +
Sbjct: 329 PGSQE 333
>AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 517 PGSAD 531
PGS +
Sbjct: 329 PGSQE 333
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -1
Query: 360 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE*LHSFDNLEVRNLL 199
RH + ++ +++ + +G VPV++ PGKL TSG E L +++V ++L
Sbjct: 118 RHALQGQMVVIAEILDPHVGEVPVEMSPGKL-LPATSGPERLPGLHDVKVGHIL 170
>AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene
positive-regulatory domain I binding factor protein.
Length = 789
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 340 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 516
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 517 PGSAD 531
PGS +
Sbjct: 329 PGSQE 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,531,927
Number of Sequences: 237096
Number of extensions: 2130596
Number of successful extensions: 6431
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6335
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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