Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B07
(1259 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.039
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 34 0.28
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.48
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 1.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.5
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.5
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 30 3.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 4.5
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 7.8
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 29 7.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 7.8
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 36.7 bits (81), Expect = 0.039
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = +3
Query: 1131 PXPPRGGGXGGXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
P PP GG G G AP LP PP PPPPPP
Sbjct: 955 PPPPPGGSAPPPG-------GGAPPLPPPPGGSAPPPPPPPPP 990
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +2
Query: 1070 PPPQQKIFFLXPPPPXXXLSPXPPXGGXRXRXGXXXFFFLGPRXXXSXPXXXGXXKXPPP 1249
PPP PPP P PP GG G G P PPP
Sbjct: 935 PPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG------GAPPLPPPPGGSAPPPPPPP 988
Query: 1250 PPP 1258
PPP
Sbjct: 989 PPP 991
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 1131 PXPPRGGGXGGXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
P PP GG G AP P PP G PPPPPP
Sbjct: 921 PPPPPPGGNAPLPPPPPG--GSAPSQPPPP--GGNAPPPPPPP 959
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +2
Query: 1070 PPPQQKIFFLXPPPPXXXLSPXPPXGGXRXRXGXXXFFFLGPRXXXSXPXXXGXXKXPPP 1249
PPP PPPP P PP G L P S P PPP
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPP--PPPPPP 991
Query: 1250 PPP 1258
PPP
Sbjct: 992 PPP 994
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +2
Query: 1070 PPPQQKIFFLXPPPPXXXL-SPXPPXGGXRXRXGXXXFFFLGPRXXXS--XPXXXGXXKX 1240
PPP L PPPP S PP GG P + P G
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAP 982
Query: 1241 PPPPPP 1258
PPPPPP
Sbjct: 983 PPPPPP 988
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.9 bits (74), Expect = 0.28
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 1191 GRAPXLPXPPXXGXKXXPPPPPP 1259
G AP P PP G PPPPPP
Sbjct: 299 GSAPAPPPPPPPGGAPPPPPPPP 321
Score = 33.5 bits (73), Expect = 0.36
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 1191 GRAPXLPXPPXXGXKXXPPPPPP 1259
G AP P PP G PPPPPP
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPP 309
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 1122 PSXPXPPRGGGXGGXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
P P GGG AP P PP PPPPPP
Sbjct: 278 PEVPDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPP 323
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 1200 PXLPXPPXXGXKXXPPPPPP 1259
P P PP G PPPPPP
Sbjct: 317 PPPPPPPPPGDGGAPPPPPP 336
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 33.1 bits (72), Expect = 0.48
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 1122 PSXPXPPRGGGXGGXGXXXFS-FWGRAPXLPXPPXXGXKXXPPPPPP 1259
P P PP GG GG G A P PP G PPPPPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGG--APPPPPP 705
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +2
Query: 1070 PPPQQKIFFLXPPPPXXXLSPXPPXGGXRXRXGXXXFFFLGPRXXXSXPXXXGXXKXPPP 1249
PPP ++ PPPP S PP R P + P G PPP
Sbjct: 316 PPPPARMGTAPPPPPPSRSSQRPPPPS---RGAPPP-----PSMGMAPPPVGGAAPPPPP 367
Query: 1250 PPP 1258
PPP
Sbjct: 368 PPP 370
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +2
Query: 1058 RAXXPPPQQKIFFLXPPPPXXXLS-PXPPXGGXRXRXGXXXFFFLGPRXXXSXPXXXGXX 1234
R PPP + PPP + P PP R P P G
Sbjct: 302 RGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGA 361
Query: 1235 KXPPPPPP 1258
PPPPPP
Sbjct: 362 APPPPPPP 369
Score = 29.9 bits (64), Expect = 4.5
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +3
Query: 1131 PXPPRGGGXG-GXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
P P RG G G AP P PP G PPPPPP
Sbjct: 339 PPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVG--GPPPPPPP 380
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 1191 GRAPXLPXPPXXGXKXXPPPPPP 1259
G+AP P PP PPPPPP
Sbjct: 461 GQAPPPPPPPPPPPPPPPPPPPP 483
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 1122 PSXPXPPRGGGXGGXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
P P PP G P P PP G PPPPPP
Sbjct: 714 PPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPP 759
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 1137 PPRG-GGXGGXGXXXFSFWGRAPXLPXPPXXGXKXXPPPPPP 1259
PP G G G WG P PP G PPPPP
Sbjct: 189 PPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPGGYPPPPP 230
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 1185 FWGRAPXLPXPPXXGXKXXPPPPPP 1259
F+G P P PP G PPPPPP
Sbjct: 648 FFGGIP--PPPPGGGMFPPPPPPPP 670
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 1122 PSXPXPPRGGGXGGXGXXXFSFW-GRAPXLPXPPXXGXKXXPPPPPP 1259
P+ P PP GGG + W P L PP PPP PP
Sbjct: 687 PAPPPPPIGGGDP-------TIWVSGGPPLSAPPLSSTLGPPPPAPP 726
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.1 bits (62), Expect = 7.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 1206 LPXPPXXGXKXXPPPPPP 1259
+P PP G PPPPPP
Sbjct: 194 VPPPPPPGPGGIPPPPPP 211
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 107 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 165
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 115 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 173
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 123 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 181
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 131 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 189
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 139 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 197
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 147 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 205
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 155 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 213
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 568 NFKVSPKKXXFGAPXXNXFWGNLNXPTXXTPX---FGGTXXXFFLNPXXXAXGPPPXXFF 738
+F +P K FG P + F+GN + P FG FF NP G P FF
Sbjct: 163 SFFGNPSKSFFGNPSKS-FFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFFGNPSKSFF 221
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 1194 RAPXLPXPPXXGXKXXPPPPPP 1259
+AP P PP PPPPPP
Sbjct: 122 QAPSPPPPPTSPATRAPPPPPP 143
Score = 29.1 bits (62), Expect = 7.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 1209 PXPPXXGXKXXPPPPPP 1259
P PP G PPPPPP
Sbjct: 188 PPPPSGGPPPPPPPPPP 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,743,598
Number of Sequences: 59808
Number of extensions: 241828
Number of successful extensions: 2732
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3952190975
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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