Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_B03
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 31 4.0
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.3
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.3
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.3
BC050521-1|AAH50521.1| 764|Homo sapiens Rho guanine nucleotide ... 31 5.3
BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein pr... 31 7.0
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 31 7.0
BC006108-1|AAH06108.1| 931|Homo sapiens G patch domain containi... 30 9.3
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 31.5 bits (68), Expect = 4.0
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +3
Query: 483 SVTPKTKPARKSPGSLPPCWKTT----EFTSRSCPPRTNST*SSITRKVLXMTVSSTVIA 650
+VTP P S G PP +T E T+ S PP +ST + +T S+T+++
Sbjct: 109 TVTPTPTPTTGSTG--PPTHTSTAPIAELTT-SNPPPESSTPQTSRSTSSPLTESTTLLS 165
Query: 651 PLTPSTPLVP*APPCT 698
L P+ + APP T
Sbjct: 166 TLPPAIEMTSTAPPST 181
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 486 VTPKTKPARKSPGSLPPCWKTTEF-TSRSCPPRTN-------ST*SSITRKVLXMTVSST 641
+T T P+ + S PP TT T+ PP T +T S +T L +++
Sbjct: 1084 ITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1143
Query: 642 VIAPLTPSTPLVP*APPC 695
+P + +TP P P C
Sbjct: 1144 TFSPFSTTTPTTPCVPLC 1161
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 486 VTPKTKPARKSPGSLPPCWKTTEF-TSRSCPPRTN-------ST*SSITRKVLXMTVSST 641
+T T P+ + S PP TT T+ PP T +T S +T L +++
Sbjct: 367 ITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 426
Query: 642 VIAPLTPSTPLVP*APPC 695
+P + +TP P P C
Sbjct: 427 TFSPFSTTTPTTPCVPLC 444
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 486 VTPKTKPARKSPGSLPPCWKTTEF-TSRSCPPRTN-------ST*SSITRKVLXMTVSST 641
+T T P+ + S PP TT T+ PP T +T S +T L +++
Sbjct: 1709 ITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1768
Query: 642 VIAPLTPSTPLVP*APPC 695
+P + +TP P P C
Sbjct: 1769 TFSPFSTTTPTTPCVPLC 1786
>BC050521-1|AAH50521.1| 764|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 7 protein.
Length = 764
Score = 31.1 bits (67), Expect = 5.3
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = +3
Query: 480 HSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAPLT 659
H VTP +K A P L P + T S P T + + T ++ L
Sbjct: 540 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTTNWGPLEP---PKTPKPWSLSCLR 596
Query: 660 PSTPLVP*APPCTK 701
P+ PL P A C K
Sbjct: 597 PAPPLRPSAALCYK 610
>BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.7 bits (66), Expect = 7.0
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 241 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 420
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 45 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101
Query: 421 KQKGPS-RPQVDRPTKPQQN 477
K G S +PQ + + +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 30.7 bits (66), Expect = 7.0
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 241 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 420
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177
Query: 421 KQKGPS-RPQVDRPTKPQQN 477
K G S +PQ + + +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197
>BC006108-1|AAH06108.1| 931|Homo sapiens G patch domain containing 1
protein.
Length = 931
Score = 30.3 bits (65), Expect = 9.3
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +2
Query: 401 EQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTE 580
+Q+ L+NK + HA +L Q NK ++ + S+ F + ++ K S+E
Sbjct: 712 QQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDE-KSSSSE 770
Query: 581 DKQYLKLDNTKGSXDDRIIYGDST--ADTFNTTGTLSPSMYESXVMFXVYNREYNQ 742
D+Q D+ GS + T +T + L P+ E F + + ++
Sbjct: 771 DEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDE 826
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,538,347
Number of Sequences: 237096
Number of extensions: 2665788
Number of successful extensions: 6877
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6877
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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