Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A22
         (1160 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   3.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   5.8  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 223 KGFFPFHLLTHGSLPIGP 170
           K FF FH + +   PIGP
Sbjct: 24  KAFFCFHGIPYAKPPIGP 41


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 223 KGFFPFHLLTHGSLPIGP 170
           K FF FH + +   PIGP
Sbjct: 24  KAFFCFHGIPYAKPPIGP 41


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 343 KPWRPW 326
           KPWRPW
Sbjct: 244 KPWRPW 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,532
Number of Sequences: 336
Number of extensions: 3493
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33815816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)