Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A22
         (1160 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 29   7.1  

>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 792

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +2

Query: 269 LNEGREFLR*SNHGTWSLVPGPPRFQKKG--AQEGKETKPKENRYLERDPQKVSQPLANL 442
           L EG E++     G+  L  GPP  +KK    +EG++  P   + +  DP     P+  L
Sbjct: 375 LREGTEYIFEVRAGS-RLGLGPPAVKKKILITKEGQDMLPSNGQKMYIDPSNYGDPMEAL 433

Query: 443 VGLA 454
           + +A
Sbjct: 434 MSIA 437


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,353,302
Number of Sequences: 59808
Number of extensions: 393214
Number of successful extensions: 606
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3592790079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)