Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A20
(905 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 35 0.003
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 30 0.084
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 30 0.084
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 30 0.11
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 29 0.26
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 28 0.34
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 28 0.45
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 28 0.45
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.59
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 27 0.78
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 1.0
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 27 1.0
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 25 2.4
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 25 3.2
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 3.2
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 3.2
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 25 4.2
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 35.1 bits (77), Expect = 0.003
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 273 IRCQKCLEFGHWSYECK 323
+RC +CLE GHW+++C+
Sbjct: 660 VRCYRCLELGHWAHDCR 676
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 30.3 bits (65), Expect = 0.084
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCS 407
+C +C E+GH + C GK R+ H+ + K EG C+
Sbjct: 213 QCYRCYEYGHTAARCHGK-------DRSSKCHRCAEDKHEGPCT 249
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.084
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECKG 326
RC KC E GH+S +CKG
Sbjct: 417 RCFKCWETGHFSRDCKG 433
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 29.9 bits (64), Expect = 0.11
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 264 PQGIRCQKCLEFGHWSYECKG---KRKILVRPSRTRIMHKNLKAKEEGQCS 407
P+ RC +CLE GH + C+ ++ + +R T HK + E +C+
Sbjct: 503 PERQRCFRCLEMGHIASNCRSTADRQNLCIRCGLTG--HKARSCQNEAKCA 551
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 0.26
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 273 IRCQKCLEFGHWSYECKG---KRKILVRPSRTRIMHKNLKAKEEGQCSNGSCKIP 428
+RC +CLE GH + +C+ ++ + +R + HK EE +C G C P
Sbjct: 549 LRCYRCLEHGHNARDCRSPVDRQNVCIRCGQEG--HKAGTCMEEIRC--GKCDGP 599
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 28.3 bits (60), Expect = 0.34
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQC 404
RC +CLE GH EC+G + + HK + + +C
Sbjct: 235 RCFRCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKC 277
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 27.9 bits (59), Expect = 0.45
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 273 IRCQKCLEFGHWSYECKGK 329
+RC +CLE GH + +C G+
Sbjct: 289 VRCFRCLERGHTTADCAGE 307
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 27.9 bits (59), Expect = 0.45
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 264 PQGIRCQKCLEFGHWSYECK 323
P+ RC +CLE GH ++ C+
Sbjct: 472 PERQRCYRCLERGHLAHACR 491
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 27.5 bits (58), Expect = 0.59
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 273 IRCQKCLEFGHWSYECKGK 329
++C KC + GH +EC G+
Sbjct: 328 VKCFKCWKLGHKGFECTGQ 346
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 27.1 bits (57), Expect = 0.78
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHK-NLKAKEEGQCSN 410
+C KC + GH SY C+ P R+ + K L ++ C+N
Sbjct: 276 KCYKCWKVGHTSYHCR-------EPDRSNLCWKCGLSGHKKQACTN 314
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 1.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECK 323
RC +CLE GH + EC+
Sbjct: 363 RCYRCLERGHIARECR 378
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 26.6 bits (56), Expect = 1.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 273 IRCQKCLEFGHWSYEC 320
+RC +CLE GH S +C
Sbjct: 404 LRCYRCLERGHVSRDC 419
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 25.4 bits (53), Expect = 2.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECK 323
RC +CLE GH + +C+
Sbjct: 389 RCYRCLERGHLARDCQ 404
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 25.0 bits (52), Expect = 3.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 327 CPCTHSSSVQTPSTSGILCLEEKQQPEL 244
C CTH + + ++ ++E QQP L
Sbjct: 608 CMCTHKVDIPLNAIVEVVLVDEVQQPNL 635
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 264 EKQQPELLAFSSQPDACYMFPESYSESQR 178
E+QQ A ++QPD PE +E++R
Sbjct: 1019 EEQQTLAAAEAAQPDPASSLPEDMAEAER 1047
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.0 bits (52), Expect = 3.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 276 RCQKCLEFGHWSYECKGK 329
RC +CLE GH + C G+
Sbjct: 465 RCFRCLERGHIAATCTGE 482
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.6 bits (51), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 152 LNICLELYCSNCNRSSIKI 96
L C+E++CS C R+ + I
Sbjct: 792 LQDCIEIFCSWCKRNGLTI 810
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,784
Number of Sequences: 2352
Number of extensions: 11854
Number of successful extensions: 36
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -